Data.Align.Demo

Browse the source of this module to see usage examples.

Global alignment.

sampleGlobalConfig :: Eq a => AlignConfig a Double

testIn1 :: [Char]

testIn2 :: [Char]

alignedGlobal :: Trace Char Double

debug :: Trace Char s -> IO ()

printAlignedGlobal :: IO ()

Multi-sequence fun.

nucs :: [[Char]]

Example from https://www.biostat.wisc.edu/bmi576/lectures/multiple-alignment.pdf

alignNuc :: Eq a => [a] -> [a] -> Trace a Double

alignedNucPairs :: [Trace Char Double]

printAlignedNucPairs :: IO ()

alignedNucStar :: MultiTrace Integer Char Double

printAlignedNucStar :: IO ()