Bio.Bam.Header

data BamMeta

parseBamMeta

parseBamMetaLine

showBamMeta

addPG

data BamKey

data BamHeader

data BamSQ

data BamSorting

type BamOtherShit

data Refseq

invalidRefseq

isValidRefseq

invalidPos

isValidPos

unknownMapq

isKnownMapq

type Refs

noRefs

getRef

compareNames

flagPaired

flagProperlyPaired

flagUnmapped

flagMateUnmapped

flagReversed

flagMateReversed

flagFirstMate

flagSecondMate

flagAuxillary

flagFailsQC

flagDuplicate

eflagTrimmed

eflagMerged

eflagVestigial

distinctBin

data MdOp

readMd

showMd