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Directory listing for bioinformatics-toolkit-0.6.0 source tarball

bioinformatics-toolkit-0.6.0/

• LICENSE
• README.md
• Setup.hs
• bioinformatics-toolkit.cabal
• benchmarks/
  • bench.hs
• src/
  • Bio/
    • GO.hs
    • Motif.hs
    • Seq.hs
    • ChIPSeq/
      • FragLen.hs
    • Data/
      • Bam.hs
      • Bed.hs
      • Fasta.hs
      • Fastq.hs
      • Bed/
        • Types.hs
        • Utils.hs
    • GO/
      • Parser.hs
    • Motif/
      • Alignment.hs
      • Merge.hs
      • Search.hs
    • RealWorld/
      • BioGRID.hs
      • ENCODE.hs
      • Ensembl.hs
      • GDC.hs
      • GENCODE.hs
      • ID.hs
      • Reactome.hs
      • UCSC.hs
      • Uniprot.hs
    • Seq/
      • IO.hs
    • Utils/
      • BitVector.hs
      • Functions.hs
      • Misc.hs
      • Overlap.hs
      • Types.hs
• tests/
  • test.hs
  • Tests/
    • Bam.hs
    • Bed.hs
    • Motif.hs
    • Seq.hs
    • Tools.hs
  • data/
    • example.bam
    • example.bed
    • example_intersect_peaks.bed
    • motifs.fasta
    • motifs.meme
    • pairedend.bam
    • pairedend.bedpe
    • peaks.bed
    • peaks.sorted.bed