Bio.MMTF.Decode

Documentation

formatData :: Monad m => Map Text Object -> m FormatData

Parses format data from ObjectMap

modelData :: Monad m => Map Text Object -> m ModelData

Parses model data from ObjectMap

chainData :: Monad m => Map Text Object -> m ChainData

Parses chain data from ObjectMap

atomData :: Monad m => Map Text Object -> m AtomData

Parses atom data from ObjectMap

groupData :: Monad m => Map Text Object -> m GroupData

Parses group data from ObjectMap

groupType :: Monad m => Map Text Object -> m GroupType

Parses group type from ObjectMap

structureData :: Monad m => Map Text Object -> m StructureData

Parses structure data from ObjectMap

bioAssembly :: Monad m => Map Text Object -> m Assembly

Parses bio assembly data from ObjectMap

transform :: Monad m => Map Text Object -> m Transform

Parses transform data from ObjectMap

entity :: Monad m => Map Text Object -> m Entity

Parses entity data from ObjectMap

c2s :: [Char] -> [Text]

Converts list of chars to list of one-sized (or zero-sized in case of zero) strings

l2v :: [a] -> Vector a

Converst list to an array

l2pl :: [a] -> [(a, a)]

List to list of pairs