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Directory listing for cobot-io-0.1.4.4 source tarball

cobot-io-0.1.4.4/

• ChangeLog.md
• LICENSE
• README.md
• Setup.hs
• cobot-io.cabal
• src/
  • Bio/
    • ABI.hs
    • FASTA.hs
    • GB.hs
    • MAE.hs
    • MMTF.hs
    • PDB.hs
    • Sequence.hs
    • Structure.hs
    • Uniprot.hs
    • ABI/
      • Clean.hs
      • Decode.hs
    • FASTA/
      • Parser.hs
      • Type.hs
      • Writer.hs
    • GB/
      • Parser.hs
      • Type.hs
      • Writer.hs
    • MAE/
      • Parser.hs
      • Type.hs
    • MMTF/
      • Decode.hs
      • MessagePack.hs
      • Type.hs
      • Decode/
        • Codec.hs
        • MessagePack.hs
    • PDB/
      • BondRestoring.hs
      • Functions.hs
      • Parser.hs
      • Reader.hs
      • Type.hs
      • Writer.hs
    • Sequence/
      • Basecalled.hs
      • Class.hs
      • Range.hs
      • Utilities.hs
      • Basecalled/
        • Type.hs
      • Functions/
        • Marking.hs
        • Sequence.hs
        • Weight.hs
    • Structure/
      • Functions.hs
    • Uniprot/
      • Parser.hs
      • Type.hs
    • Utils/
      • Map.hs
      • Vector.hs
• test/
  • ABISpec.hs
  • FASTASpec.hs
  • FastaParserSpec.hs
  • FastaWriterSpec.hs
  • GBParserSpec.hs
  • GBWriterSpec.hs
  • MAEParserSpec.hs
  • MAESpec.hs
  • MMTFSpec.hs
  • PDBParserSpec.hs
  • PDBSpec.hs
  • PDBWriterSpec.hs
  • RangeSpec.hs
  • SequenceSpec.hs
  • Spec.hs
  • StructureSpec.hs
  • UniprotSpec.hs
  • ABI/
    • bad.ab1
    • bad_at_the_end.ab1
    • bad_quality.ab1
    • not_ab1.txt
    • test.ab1
  • FASTA/
    • correct.fasta
  • GB/
    • fromYanaWithLove.gb
    • pAAV-GFP-CellBioLab-dots.gb
    • pAAV-GFP-CellBioLab.gb
    • pAAV_CMV_RPE65_PolyA_linkers.gb
    • pIntA-TRBV.gb
  • MAE/
    • Capri.mae
    • GLY_3.mae
    • docking_1.mae
    • docking_1_2.mae
    • docking_2.mae
    • h2o.mae
    • schrod_test.mae
    • small.mae
  • MMTF/
    • 1FSD.dms
  • PDB/
    • 1PPE_I.mae
    • 1PPE_I.pdb
    • 1igt.pdb
    • 6a0z.HLHL.pdb
    • BondsRestoring/
      • 1vfb_ab_b.mae
      • 1vfb_ab_b.pdb
      • 3mxw_ab_b.mae
      • 3mxw_ab_b.pdb
      • 4dn4_ag_b.mae
      • 4dn4_ag_b.pdb
      • ALA_3.mae
      • ALA_3.pdb
      • ARG_3.mae
      • ARG_3.pdb
      • ASN_3.mae
      • ASN_3.pdb
      • ASP_3.mae
      • ASP_3.pdb
      • CYS_3.mae
      • CYS_3.pdb
      • GLN_3.mae
      • GLN_3.pdb
      • GLU_3.mae
      • GLU_3.pdb
      • GLY_3.mae
      • GLY_3.pdb
      • HID_3.mae
      • HID_3.pdb
      • HIE_3.mae
      • HIE_3.pdb
      • HIP_3.mae
      • HIP_3.pdb
      • ILE_3.mae
      • ILE_3.pdb
      • LEU_3.mae
      • LEU_3.pdb
      • LYS_3.mae
      • LYS_3.pdb
      • MET_3.mae
      • MET_3.pdb
      • PHE_3.mae
      • PHE_3.pdb
      • PRO_3.mae
      • PRO_3.pdb
      • SER_3.mae
      • SER_3.pdb
      • THR_3.mae
      • THR_3.pdb
      • TRP_3.mae
      • TRP_3.pdb
      • TYR_3.mae
      • TYR_3.pdb
      • VAL_3.mae
      • VAL_3.pdb
    • Writer/
      • big_file.pdb
      • hetatms.pdb
      • several_models.pdb