| Safe Haskell | None |
|---|---|
| Language | Haskell98 |
Math.Diversity.Diversity
Description
Collection of functions pertaining to finding the diversity of samples.
- hamming :: String -> String -> Int
- diversity :: Ord b => Double -> [b] -> Double
- diversityOfMap :: Double -> Map (Sample, Fragment) Int -> Double
- rarefactionCurve :: Bool -> Int -> Integer -> Integer -> Map (Sample, Fragment) Int -> IO [(Int, (Double, Double))]
- rarefactionSampleCurve :: Bool -> Int -> Int -> Map (Sample, Fragment) Int -> IO [(Int, (Double, Double))]
- rarefactionViable :: [Double] -> Double
Documentation
diversityOfMap :: Double -> Map (Sample, Fragment) Int -> Double Source
Returns the diversity of a map of things
rarefactionCurve :: Bool -> Int -> Integer -> Integer -> Map (Sample, Fragment) Int -> IO [(Int, (Double, Double))] Source
Returns the rarefaction curve for each position in a list
rarefactionSampleCurve :: Bool -> Int -> Int -> Map (Sample, Fragment) Int -> IO [(Int, (Double, Double))] Source
Returns the rarefaction curve for each position in a list
rarefactionViable :: [Double] -> Double Source
Calculates the percent of the curve that is above 95% of height of the curve