{-# LANGUAGE PatternGuards, ScopedTypeVariables, BangPatterns, FlexibleContexts #-} module Text.EditDistance.STUArray ( levenshteinDistance, levenshteinDistanceWithLengths, restrictedDamerauLevenshteinDistance, restrictedDamerauLevenshteinDistanceWithLengths ) where import Text.EditDistance.EditCosts import Text.EditDistance.MonadUtilities import Text.EditDistance.ArrayUtilities import Control.Monad hiding (foldM) import Control.Monad.ST import Data.Array.ST levenshteinDistance :: EditCosts -> String -> String -> Int levenshteinDistance !costs str1 str2 = levenshteinDistanceWithLengths costs str1_len str2_len str1 str2 where str1_len = length str1 str2_len = length str2 levenshteinDistanceWithLengths :: EditCosts -> Int -> Int -> String -> String -> Int levenshteinDistanceWithLengths !costs !str1_len !str2_len str1 str2 = runST (levenshteinDistanceST costs str1_len str2_len str1 str2) levenshteinDistanceST :: EditCosts -> Int -> Int -> String -> String -> ST s Int levenshteinDistanceST !costs !str1_len !str2_len str1 str2 = do -- Create string arrays str1_array <- stringToArray str1 str1_len str2_array <- stringToArray str2 str2_len -- Create array of costs for a single row. Say we index costs by (i, j) where i is the column index and j the row index. -- Rows correspond to characters of str2 and columns to characters of str1. We can get away with just storing a single -- row of costs at a time, but we use two because it turns out to be faster cost_row <- newArray_ (0, str1_len) :: ST s (STUArray s Int Int) cost_row' <- newArray_ (0, str1_len) :: ST s (STUArray s Int Int) read_str1 <- unsafeReadArray' str1_array read_str2 <- unsafeReadArray' str2_array -- Fill out the first row (j = 0) _ <- (\f -> foldM f (1, 0) str1) $ \(i, deletion_cost) col_char -> let deletion_cost' = deletion_cost + deletionCost costs col_char in unsafeWriteArray cost_row i deletion_cost' >> return (i + 1, deletion_cost') -- Fill out the remaining rows (j >= 1) (_, final_row, _) <- (\f -> foldM f (0, cost_row, cost_row') [1..str2_len]) $ \(!insertion_cost, !cost_row, !cost_row') !j -> do row_char <- read_str2 j -- Initialize the first element of the row (i = 0) let insertion_cost' = insertion_cost + insertionCost costs row_char unsafeWriteArray cost_row' 0 insertion_cost' -- Fill the remaining elements of the row (i >= 1) loopM_ 1 str1_len $ \(!i) -> do col_char <- read_str1 i left_up <- unsafeReadArray cost_row (i - 1) left <- unsafeReadArray cost_row' (i - 1) here_up <- unsafeReadArray cost_row i let here = standardCosts costs row_char col_char left left_up here_up unsafeWriteArray cost_row' i here return (insertion_cost', cost_row', cost_row) -- Return an actual answer unsafeReadArray final_row str1_len restrictedDamerauLevenshteinDistance :: EditCosts -> String -> String -> Int restrictedDamerauLevenshteinDistance !costs str1 str2 = restrictedDamerauLevenshteinDistanceWithLengths costs str1_len str2_len str1 str2 where str1_len = length str1 str2_len = length str2 restrictedDamerauLevenshteinDistanceWithLengths :: EditCosts -> Int -> Int -> String -> String -> Int restrictedDamerauLevenshteinDistanceWithLengths !costs !str1_len !str2_len str1 str2 = runST (restrictedDamerauLevenshteinDistanceST costs str1_len str2_len str1 str2) restrictedDamerauLevenshteinDistanceST :: EditCosts -> Int -> Int -> String -> String -> ST s Int restrictedDamerauLevenshteinDistanceST !costs str1_len str2_len str1 str2 = do -- Create string arrays str1_array <- stringToArray str1 str1_len str2_array <- stringToArray str2 str2_len -- Create array of costs for a single row. Say we index costs by (i, j) where i is the column index and j the row index. -- Rows correspond to characters of str2 and columns to characters of str1. We can get away with just storing two -- rows of costs at a time, but I use three because it turns out to be faster cost_row <- newArray_ (0, str1_len) :: ST s (STUArray s Int Int) read_str1 <- unsafeReadArray' str1_array read_str2 <- unsafeReadArray' str2_array -- Fill out the first row (j = 0) _ <- (\f -> foldM f (1, 0) str1) $ \(i, deletion_cost) col_char -> let deletion_cost' = deletion_cost + deletionCost costs col_char in unsafeWriteArray cost_row i deletion_cost' >> return (i + 1, deletion_cost') if (str2_len == 0) then unsafeReadArray cost_row str1_len else do -- We defer allocation of these arrays to here because they aren't used in the other branch cost_row' <- newArray_ (0, str1_len) :: ST s (STUArray s Int Int) cost_row'' <- newArray_ (0, str1_len) :: ST s (STUArray s Int Int) -- Fill out the second row (j = 1) row_char <- read_str2 1 -- Initialize the first element of the row (i = 0) let zero = insertionCost costs row_char unsafeWriteArray cost_row' 0 zero -- Fill the remaining elements of the row (i >= 1) loopM_ 1 str1_len (firstRowColWorker read_str1 row_char cost_row cost_row') -- Fill out the remaining rows (j >= 2) (_, _, final_row, _, _) <- foldM (restrictedDamerauLevenshteinDistanceSTRowWorker costs str1_len read_str1 read_str2) (zero, cost_row, cost_row', cost_row'', row_char) [2..str2_len] -- Return an actual answer unsafeReadArray final_row str1_len where {-# INLINE firstRowColWorker #-} firstRowColWorker read_str1 !row_char !cost_row !cost_row' !i = do col_char <- read_str1 i left_up <- unsafeReadArray cost_row (i - 1) left <- unsafeReadArray cost_row' (i - 1) here_up <- unsafeReadArray cost_row i let here = standardCosts costs row_char col_char left left_up here_up unsafeWriteArray cost_row' i here {-# INLINE restrictedDamerauLevenshteinDistanceSTRowWorker #-} restrictedDamerauLevenshteinDistanceSTRowWorker :: EditCosts -> Int -> (Int -> ST s Char) -> (Int -> ST s Char) -- String array accessors -> (Int, STUArray s Int Int, STUArray s Int Int, STUArray s Int Int, Char) -> Int -- Incoming rows of the matrix in recency order -> ST s (Int, STUArray s Int Int, STUArray s Int Int, STUArray s Int Int, Char) -- Outgoing rows of the matrix in recency order restrictedDamerauLevenshteinDistanceSTRowWorker !costs !str1_len read_str1 read_str2 (!insertion_cost, !cost_row, !cost_row', !cost_row'', !prev_row_char) !j = do row_char <- read_str2 j -- Initialize the first element of the row (i = 0) zero_up <- unsafeReadArray cost_row' 0 let insertion_cost' = insertion_cost + insertionCost costs row_char unsafeWriteArray cost_row'' 0 insertion_cost' -- Initialize the second element of the row (i = 1) when (str1_len > 0) $ do col_char <- read_str1 1 one_up <- unsafeReadArray cost_row' 1 let one = standardCosts costs row_char col_char insertion_cost' zero_up one_up unsafeWriteArray cost_row'' 1 one -- Fill the remaining elements of the row (i >= 2) loopM_ 2 str1_len (colWorker row_char) return (insertion_cost', cost_row', cost_row'', cost_row, row_char) where colWorker !row_char !i = do prev_col_char <- read_str1 (i - 1) col_char <- read_str1 i left_left_up_up <- unsafeReadArray cost_row (i - 2) left_up <- unsafeReadArray cost_row' (i - 1) left <- unsafeReadArray cost_row'' (i - 1) here_up <- unsafeReadArray cost_row' i let here_standard_only = standardCosts costs row_char col_char left left_up here_up here = if prev_row_char == col_char && prev_col_char == row_char then here_standard_only `min` (left_left_up_up + transpositionCost costs col_char row_char) else here_standard_only unsafeWriteArray cost_row'' i here {-# INLINE standardCosts #-} standardCosts :: EditCosts -> Char -> Char -> Int -> Int -> Int -> Int standardCosts !costs !row_char !col_char !cost_left !cost_left_up !cost_up = deletion_cost `min` insertion_cost `min` subst_cost where deletion_cost = cost_left + deletionCost costs col_char insertion_cost = cost_up + insertionCost costs row_char subst_cost = cost_left_up + if row_char == col_char then 0 else substitutionCost costs col_char row_char