elynx-seq-0.7.2.0: Handle molecular sequences
Copyright2021 Dominik Schrempf
LicenseGPL-3.0-or-later
Maintainerdominik.schrempf@gmail.com
Stabilityunstable
Portabilityportable
Safe HaskellSafe-Inferred
LanguageHaskell2010

ELynx.Character.AminoAcidX

Description

Creation date: Thu Oct 4 18:26:35 2018.

See header of Alphabet.

Extended amino acid with gaps. See also https://www.bioinformatics.org/sms/iupac.html or https://en.wikipedia.org/wiki/International_Union_of_Pure_and_Applied_Chemistry.

Amino Acid Code:  Three letter Code:  Amino Acid:
----------------  ------------------  -----------
A                 Ala                 Alanine
C                 Cys                 Cysteine
D                 Asp                 Aspartic Acid
E                 Glu                 Glutamic Acid
F                 Phe                 Phenylalanine
G                 Gly                 Glycine
H                 His                 Histidine
I                 Ile                 Isoleucine
K                 Lys                 Lysine
L                 Leu                 Leucine
M                 Met                 Methionine
N                 Asn                 Asparagine
P                 Pro                 Proline
Q                 Gln                 Glutamine
R                 Arg                 Arginine
S                 Ser                 Serine
T                 Thr                 Threonine
V                 Val                 Valine
W                 Trp                 Tryptophan
Y                 Tyr                 Tyrosine
----------------  ------------------  -----------
-                 Gap                 No amino acid
.                 Gap                 No amino acid
Synopsis

Documentation

data AminoAcidX Source #

Amino acids.

Constructors

A 
C 
D 
E 
F 
G 
H 
I 
K 
L 
M 
N 
P 
Q 
R 
S 
T 
V 
W 
Y 
Gap 

Instances

Instances details
Bounded AminoAcidX Source # 
Instance details

Defined in ELynx.Character.AminoAcidX

Enum AminoAcidX Source # 
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Defined in ELynx.Character.AminoAcidX

Read AminoAcidX Source # 
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Defined in ELynx.Character.AminoAcidX

Show AminoAcidX Source # 
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Defined in ELynx.Character.AminoAcidX

Character AminoAcidX Source # 
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Defined in ELynx.Character.AminoAcidX

CharacterX AminoAcidX Source # 
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Defined in ELynx.Character.AminoAcidX

Eq AminoAcidX Source # 
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Defined in ELynx.Character.AminoAcidX

Ord AminoAcidX Source # 
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Defined in ELynx.Character.AminoAcidX

Unbox AminoAcidX Source # 
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Defined in ELynx.Character.AminoAcidX

Vector Vector AminoAcidX Source # 
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Defined in ELynx.Character.AminoAcidX

MVector MVector AminoAcidX Source # 
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Defined in ELynx.Character.AminoAcidX

newtype Vector AminoAcidX Source # 
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Defined in ELynx.Character.AminoAcidX

newtype MVector s AminoAcidX Source # 
Instance details

Defined in ELynx.Character.AminoAcidX