úÎ[TTÙa      !"#$%&'()*+,-./0123456789 : ; < = > ? @ A B C D E F G H I J K L M N O P Q R S T U V W X YZ[\]^_` Safe-InferredXA clone is a collection of sequences derived from a germline with a specific identifier      None 4Parse a standard fasta file into lazy text sequences 0Parse a CLIP fasta file into lazy text sequences ´Parse a standard fasta file into strict text sequences for pipes. This is the highly recommeded way of parsing, as it is computationally fast and uses memory based on line length(Remove Ns from a collection of sequencesRemove Ns from a sequence3Remove Ns from a collection of CLIP fasta sequences abcdef    abcdef  Safe-Inferred#Lazy ByteString version of chunksOf<Converts a codon to an amino acid Remember, if there is an NM in that DNA sequence, then it is translated as an X, an unknown amino acid.ÀTranslates a bytestring of nucleotides given a reading frame (1, 2, or 3) -- drops the first 0, 1, or 2 nucleotides respectively. Returns a bytestring with the error if the codon is invalid.None  Safe-InferredXA clone is a collection of sequences derived from a germline with a specific identifier   None/Parse a standard fasta file into text sequences +Parse a CLIP fasta file into text sequences!´Parse a standard fasta file into strict text sequences for pipes. This is the highly recommeded way of parsing, as it is computationally fast and uses memory based on line length"(Remove Ns from a collection of sequences#Remove Ns from a sequence$3Remove Ns from a collection of CLIP fasta sequences ghijkl !"#$ !"#$ !"#$ ghijkl !"#$ Safe-Inferred%ByteString version of chunksOf&<Converts a codon to an amino acid Remember, if there is an NM in that DNA sequence, then it is translated as an X, an unknown amino acid.'ÀTranslates a bytestring of nucleotides given a reading frame (1, 2, or 3) -- drops the first 0, 1, or 2 nucleotides respectively. Returns a bytestring with the error if the codon is invalid.%&'%&'%&'%&'None !"#$%&' Safe-Inferred*XA clone is a collection of sequences derived from a germline with a specific identifier ()*+,-./012 ()*+,-./01 ./01-,+*()2()*+,-./012None34Parse a standard fasta file into lazy text sequences40Parse a CLIP fasta file into lazy text sequences5´Parse a standard fasta file into strict text sequences for pipes. This is the highly recommeded way of parsing, as it is computationally fast and uses memory based on line length6(Remove Ns from a collection of sequences7Remove Ns from a sequence83Remove Ns from a collection of CLIP fasta sequences mnopqr345678345678345678 mnopqr345678  Safe-Inferred9<Converts a codon to an amino acid Remember, if there is an NM in that DNA sequence, then it is translated as an X, an unknown amino acid.:´Translates a text of nucleotides given a reading frame (1, 2, or 3) -- drops the first 0, 1, or 2 nucleotides respectively. Returns a text with the error if the codon is invalid.9:9:9:9:None()*+,-./013456789:  Safe-Inferred=XA clone is a collection of sequences derived from a germline with a specific identifier ;<=>?@ABCDE ;<=>?@ABCD ABCD@?>=;<E;<=>?@ABCDE NoneF/Parse a standard fasta file into text sequencesG+Parse a CLIP fasta file into text sequencesH´Parse a standard fasta file into strict text sequences for pipes. This is the highly recommeded way of parsing, as it is computationally fast and uses memory based on line lengthI(Remove Ns from a collection of sequencesJRemove Ns from a sequenceK3Remove Ns from a collection of CLIP fasta sequences stuvwxFGHIJKFGHIJKFGHIJK stuvwxFGHIJK  Safe-InferredL<Converts a codon to an amino acid Remember, if there is an NM in that DNA sequence, then it is translated as an X, an unknown amino acid.M´Translates a text of nucleotides given a reading frame (1, 2, or 3) -- drops the first 0, 1, or 2 nucleotides respectively. Returns a text with the error if the codon is invalid.LMLMLMLMNone;<=>?@ABCDFGHIJKLM  Safe-InferredPXA clone is a collection of sequences derived from a germline with a specific identifier NOPQRSTUVWX NOPQRSTUVW TUVWSRQPNOXNOPQRSTUVWX Safe-InferredY1Parse a standard fasta file into string sequencesZ-Parse a CLIP fasta file into string sequences[¨Parse a standard fasta file into string sequences for pipes. This is the highly recommeded way of parsing, as it is computationally fast and uses constant file memory\(Remove Ns from a collection of sequences]Remove Ns from a sequence^3Remove Ns from a collection of CLIP fasta sequences yz{|}~YZ[\]^YZ[\]^YZ[\]^ yz{|}~YZ[\]^ Safe-Inferred_<Converts a codon to an amino acid Remember, if there is an NM in that DNA sequence, then it is translated as an X, an unknown amino acid.`¸Translates a string of nucleotides given a reading frame (1, 2, or 3) -- drops the first 0, 1, or 2 nucleotides respectively. Returns a string with the error if the codon is invalid._`_`_`_` Safe-InferredNOPQRSTUVWYZ[\]^_` !"#$%&' !"#$%&' !"#$ & '             ! " # $ & '            !"#$&'()*+,-()*+,-()*+,- ( ) * + , -()*+,-. fasta-0.8.0.0 Data.Fasta.ByteString.Lazy.Types Data.Fasta.ByteString.Lazy.Parse&Data.Fasta.ByteString.Lazy.TranslationData.Fasta.ByteString.TypesData.Fasta.ByteString.Parse!Data.Fasta.ByteString.TranslationData.Fasta.Text.Lazy.TypesData.Fasta.Text.Lazy.Parse Data.Fasta.Text.Lazy.TranslationData.Fasta.Text.TypesData.Fasta.Text.ParseData.Fasta.Text.TranslationData.Fasta.String.TypesData.Fasta.String.ParseData.Fasta.String.TranslationData.Fasta.ByteString.LazyData.Fasta.ByteStringData.Fasta.Text.LazyData.Fasta.TextData.Fasta.String ShowFasta showFastaCloneMapCodonGermlineClone FastaSequence fastaHeaderfastaSeq$fShowFastaFastaSequence parseFastaparseCLIPFasta pipesFastaremoveNsremoveN removeCLIPNschunksOfcodon2aa translateeoleoefasta fastaFile fastaCLIP fastaCLIPFile