Safe Haskell | None |
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- resname2fastacode :: String -> Char
- fastacode2resname :: Char -> String
- defaultResname :: String
- defaultFastaCode :: Char
- fastaSequence :: Iterable a Residue => a -> [Char]
- fastaGappedSequence :: Iterable a Residue => a -> [Char]
- fastaRecord :: [Char] -> Chain -> [Char]
- fastaGappedRecord :: [Char] -> Chain -> [Char]
Documentation
resname2fastacode :: String -> CharSource
Dictionary mapping three-letter PDB residue code to a single-letter FASTA code.
fastacode2resname :: Char -> StringSource
Dictionary mapping single-letter FASTA standard aminoacid code to a PDB residue name
defaultResname :: StringSource
Three-letter PDB code for an unknown type of residue.
defaultFastaCode :: CharSource
One-letter aminoacid code for an unknown type of residue.
fastaSequence :: Iterable a Residue => a -> [Char]Source
fastaGappedSequence :: Iterable a Residue => a -> [Char]Source
fastaRecord :: [Char] -> Chain -> [Char]Source
fastaGappedRecord :: [Char] -> Chain -> [Char]Source