Index

!	Bio.PDB.Structure.List
*\|	Bio.PDB.Structure.Vector, Bio.PDB.Structure, Bio.PDB
++	Bio.PDB.Structure.List
a	Bio.PDB.EventParser.PDBEvents
accessionCode	Bio.PDB.EventParser.PDBEvents
add	Bio.PDB.Structure.List
advResidue	Bio.PDB.EventParser.PDBEvents
aList	Bio.PDB.EventParser.PDBEvents
alpha	Bio.PDB.EventParser.PDBEvents
altloc	Bio.PDB.EventParser.PDBEvents
altloc1	Bio.PDB.EventParser.PDBEvents
altloc2	Bio.PDB.EventParser.PDBEvents
altlocH	Bio.PDB.EventParser.PDBEvents
angle	Bio.PDB.EventParser.PDBEvents
ANISOU	Bio.PDB.EventParser.PDBEvents
Antiparallel	Bio.PDB.EventParser.StrandSense, Bio.PDB.EventParser.PDBEvents
assignElement	Bio.PDB.Structure.Elements, Bio.PDB
at1	Bio.PDB.EventParser.PDBEvents
at2	Bio.PDB.EventParser.PDBEvents
atH	Bio.PDB.EventParser.PDBEvents
ATID
1 (Type/Class)	Bio.PDB.EventParser.PDBEvents
2 (Data Constructor)	Bio.PDB.EventParser.PDBEvents
atmNum	Bio.PDB.EventParser.PDBEvents
atName	Bio.PDB.Structure, Bio.PDB
ATOM	Bio.PDB.EventParser.PDBEvents
Atom
1 (Type/Class)	Bio.PDB.Structure, Bio.PDB
2 (Data Constructor)	Bio.PDB.Structure, Bio.PDB
atomicMass	Bio.PDB.Structure.Elements, Bio.PDB
atomicNumber	Bio.PDB.Structure.Elements, Bio.PDB
AtomOctree	Bio.PDB.Structure.Neighbours
atoms
1 (Function)	Bio.PDB.EventParser.PDBEvents
2 (Function)	Bio.PDB.Structure, Bio.PDB
atomtype	Bio.PDB.EventParser.PDBEvents
atSerial	Bio.PDB.Structure, Bio.PDB
AUTHOR	Bio.PDB.EventParser.PDBEvents
b	Bio.PDB.EventParser.PDBEvents
beta	Bio.PDB.EventParser.PDBEvents
bFactor	Bio.PDB.Structure, Bio.PDB
bfactor	Bio.PDB.EventParser.PDBEvents
bondLen	Bio.PDB.EventParser.PDBEvents
c	Bio.PDB.EventParser.PDBEvents
CAVEAT	Bio.PDB.EventParser.PDBEvents
Chain
1 (Type/Class)	Bio.PDB.Structure, Bio.PDB
2 (Data Constructor)	Bio.PDB.Structure, Bio.PDB
chain	Bio.PDB.EventParser.PDBEvents
chainId	Bio.PDB.Structure, Bio.PDB
chains	Bio.PDB.Structure, Bio.PDB
chainVectorSize	Bio.PDB.Structure.List
charge
1 (Function)	Bio.PDB.EventParser.PDBEvents
2 (Function)	Bio.PDB.Structure, Bio.PDB
CISPEP	Bio.PDB.EventParser.PDBEvents
classification	Bio.PDB.EventParser.PDBEvents
code2helix	Bio.PDB.EventParser.HelixTypes
codes	Bio.PDB.EventParser.PDBEvents
comment	Bio.PDB.EventParser.PDBEvents
COMPND	Bio.PDB.EventParser.PDBEvents
compNum	Bio.PDB.EventParser.PDBEvents
concat	Bio.PDB.Structure.List
CONECT	Bio.PDB.EventParser.PDBEvents
cont	Bio.PDB.EventParser.PDBEvents
content	Bio.PDB.EventParser.PDBEvents
continuation	Bio.PDB.EventParser.PDBEvents
coord	Bio.PDB.Structure, Bio.PDB
coords	Bio.PDB.EventParser.PDBEvents
covalentRadius	Bio.PDB.Structure.Elements, Bio.PDB
CRYST1	Bio.PDB.EventParser.PDBEvents
curAt	Bio.PDB.EventParser.PDBEvents
database	Bio.PDB.EventParser.PDBEvents
date	Bio.PDB.EventParser.PDBEvents
DBREF	Bio.PDB.EventParser.PDBEvents
dbResname	Bio.PDB.EventParser.PDBEvents
dbSeqNum	Bio.PDB.EventParser.PDBEvents
defaultFastaCode	Bio.PDB.Fasta
defaultResname	Bio.PDB.Fasta
defaultSize	Bio.PDB.Structure.List
depDate	Bio.PDB.EventParser.PDBEvents
description	Bio.PDB.EventParser.PDBEvents
details	Bio.PDB.EventParser.PDBEvents
ElectronCrystallography	Bio.PDB.EventParser.ExperimentalMethods, Bio.PDB.EventParser.PDBEvents
ElectronMicroscopy	Bio.PDB.EventParser.ExperimentalMethods, Bio.PDB.EventParser.PDBEvents
Element	Bio.PDB.Structure.Elements, Bio.PDB
element	Bio.PDB.Structure, Bio.PDB
elt	Bio.PDB.EventParser.PDBEvents
empty	Bio.PDB.Structure.List
END	Bio.PDB.EventParser.PDBEvents
endInsCodeInPDBRef	Bio.PDB.EventParser.PDBEvents
endInsCodePDB	Bio.PDB.EventParser.PDBEvents
ENDMDL	Bio.PDB.EventParser.PDBEvents
endRes	Bio.PDB.EventParser.PDBEvents
endSeqNumInDb	Bio.PDB.EventParser.PDBEvents
endSeqNumPDB	Bio.PDB.EventParser.PDBEvents
entries	Bio.PDB.EventParser.PDBEvents
EXPDTA	Bio.PDB.EventParser.PDBEvents
ExpMethod	Bio.PDB.EventParser.ExperimentalMethods, Bio.PDB.EventParser.PDBEvents
expMethods	Bio.PDB.EventParser.PDBEvents
fastacode2resname	Bio.PDB.Fasta, Bio.PDB
fastaGappedRecord	Bio.PDB.Fasta
fastaGappedSequence	Bio.PDB.Fasta
fastaRecord	Bio.PDB.Fasta
fastaSequence	Bio.PDB.Fasta
FiberDiffraction	Bio.PDB.EventParser.ExperimentalMethods, Bio.PDB.EventParser.PDBEvents
filter	Bio.PDB.Structure.List
finalize	Bio.PDB.Structure.List
findInRadius	Bio.PDB.Structure.Neighbours
findNearest	Bio.PDB.Structure.Neighbours
firstModel	Bio.PDB.Iterable, Bio.PDB
foldl	Bio.PDB.Structure.List
foldl'	Bio.PDB.Structure.List
foldM	Bio.PDB.Structure.List
foldr	Bio.PDB.Structure.List
FORMUL	Bio.PDB.EventParser.PDBEvents
formula	Bio.PDB.EventParser.PDBEvents
gamma	Bio.PDB.EventParser.PDBEvents
guessElement	Bio.PDB.Structure.Elements
head	Bio.PDB.Structure.List
HEADER	Bio.PDB.EventParser.PDBEvents
HELIX	Bio.PDB.EventParser.PDBEvents
helix2code	Bio.PDB.EventParser.HelixTypes
helixClass	Bio.PDB.EventParser.PDBEvents
HelixT	Bio.PDB.EventParser.HelixTypes, Bio.PDB.EventParser.PDBEvents
HET	Bio.PDB.EventParser.PDBEvents
hetatm
1 (Function)	Bio.PDB.EventParser.PDBEvents
2 (Function)	Bio.PDB.Structure, Bio.PDB
hetId	Bio.PDB.EventParser.PDBEvents
HETNAM	Bio.PDB.EventParser.PDBEvents
HYDBND	Bio.PDB.EventParser.PDBEvents
idCode	Bio.PDB.EventParser.PDBEvents
iniInsCodeInPDBRef	Bio.PDB.EventParser.PDBEvents
iniInsCodePDB	Bio.PDB.EventParser.PDBEvents
iniRes	Bio.PDB.EventParser.PDBEvents
iniSeqNumInDb	Bio.PDB.EventParser.PDBEvents
iniSeqNumPDB	Bio.PDB.EventParser.PDBEvents
init	Bio.PDB.Structure.List
initialNew	Bio.PDB.Structure.List
insCode
1 (Function)	Bio.PDB.EventParser.PDBEvents
2 (Function)	Bio.PDB.Structure, Bio.PDB
isFirst	Bio.PDB.EventParser.PDBEvents
isPrintable	Bio.PDB.EventParser.PDBEventPrinter
isWater	Bio.PDB.EventParser.PDBEvents
Iterable	Bio.PDB.Iterable, Bio.PDB
itfoldl	Bio.PDB.Iterable, Bio.PDB
itfoldl'	Bio.PDB.Iterable, Bio.PDB
itfoldM	Bio.PDB.Iterable, Bio.PDB
itfoldr	Bio.PDB.Iterable, Bio.PDB
itlength	Bio.PDB.Iterable, Bio.PDB
itmap	Bio.PDB.Iterable, Bio.PDB
itmapM	Bio.PDB.Iterable, Bio.PDB
JRNL	Bio.PDB.EventParser.PDBEvents
KEYWDS	Bio.PDB.EventParser.PDBEvents
last	Bio.PDB.Structure.List
len	Bio.PDB.EventParser.PDBEvents
length	Bio.PDB.Structure.List
LINK	Bio.PDB.EventParser.PDBEvents
linkdist	Bio.PDB.EventParser.PDBEvents
List	Bio.PDB.Structure.List
makeOctree	Bio.PDB.Structure.Neighbours
map	Bio.PDB.Structure.List
mapM	Bio.PDB.Structure.List
MASTER	Bio.PDB.EventParser.PDBEvents
maxCovalentRadius	Bio.PDB.Structure.Elements
maxVanDerWaalsRadius	Bio.PDB.Structure.Elements
MDLTYP	Bio.PDB.EventParser.PDBEvents
mkExpMethod	Bio.PDB.EventParser.ExperimentalMethods
modDat	Bio.PDB.EventParser.PDBEvents
MODEL	Bio.PDB.EventParser.PDBEvents
Model
1 (Type/Class)	Bio.PDB.Structure, Bio.PDB
2 (Data Constructor)	Bio.PDB.Structure, Bio.PDB
modelId	Bio.PDB.Structure, Bio.PDB
models	Bio.PDB.Structure, Bio.PDB
modId	Bio.PDB.EventParser.PDBEvents
modNum	Bio.PDB.EventParser.PDBEvents
MODRES	Bio.PDB.EventParser.PDBEvents
modTyp	Bio.PDB.EventParser.PDBEvents
MTRIXn	Bio.PDB.EventParser.PDBEvents
n	Bio.PDB.EventParser.PDBEvents
name	Bio.PDB.EventParser.PDBEvents
NeutronDiffraction	Bio.PDB.EventParser.ExperimentalMethods, Bio.PDB.EventParser.PDBEvents
new	Bio.PDB.Structure.List
no	Bio.PDB.EventParser.PDBEvents
notSynonym	Bio.PDB.EventParser.PDBEvents
num	Bio.PDB.EventParser.PDBEvents
numAtoms	Bio.PDB.Iterable, Bio.PDB
numAts	Bio.PDB.EventParser.PDBEvents
numChains	Bio.PDB.Iterable, Bio.PDB
numConect	Bio.PDB.EventParser.PDBEvents
numHelix	Bio.PDB.EventParser.PDBEvents
numHet	Bio.PDB.EventParser.PDBEvents
numMaster	Bio.PDB.EventParser.PDBEvents
NUMMDL	Bio.PDB.EventParser.PDBEvents
numModels	Bio.PDB.Iterable, Bio.PDB
numRemark	Bio.PDB.EventParser.PDBEvents
numres	Bio.PDB.EventParser.PDBEvents
numResidues	Bio.PDB.Iterable, Bio.PDB
numSeqres	Bio.PDB.EventParser.PDBEvents
numSheet	Bio.PDB.EventParser.PDBEvents
numSite	Bio.PDB.EventParser.PDBEvents
numStrands	Bio.PDB.EventParser.PDBEvents
numTurn	Bio.PDB.EventParser.PDBEvents
numXform	Bio.PDB.EventParser.PDBEvents
o	Bio.PDB.EventParser.PDBEvents
OBSLTE	Bio.PDB.EventParser.PDBEvents
occupancy
1 (Function)	Bio.PDB.EventParser.PDBEvents
2 (Function)	Bio.PDB.Structure, Bio.PDB
ORIGXn	Bio.PDB.EventParser.PDBEvents
OtherExpMethod	Bio.PDB.EventParser.ExperimentalMethods, Bio.PDB.EventParser.PDBEvents
Parallel	Bio.PDB.EventParser.StrandSense, Bio.PDB.EventParser.PDBEvents
parse
1 (Function)	Bio.PDB.StructureBuilder
2 (Function)	Bio.PDB.IO, Bio.PDB
parseParallel	Bio.PDB.StructureBuilder
parsePDBRecords	Bio.PDB.EventParser.PDBEventParser
parseSerial	Bio.PDB.StructureBuilder
parseWithNParallel	Bio.PDB.StructureBuilder
pdbCode	Bio.PDB.EventParser.PDBEvents
PDBEvent	Bio.PDB.EventParser.PDBEvents
pdbId	Bio.PDB.EventParser.PDBEvents
pdbid	Bio.PDB.EventParser.PDBEvents
PDBIgnoredLine	Bio.PDB.EventParser.PDBEvents
PDBParseError	Bio.PDB.EventParser.PDBEvents
PDBWritable	Bio.PDB.StructurePrinter, Bio.PDB.IO, Bio.PDB
prevAt	Bio.PDB.EventParser.PDBEvents
print	Bio.PDB.EventParser.PDBEventPrinter
readFile	Bio.PDB.IO.OpenAnyFile
relMol	Bio.PDB.EventParser.PDBEvents
REMARK	Bio.PDB.EventParser.PDBEvents
res1	Bio.PDB.EventParser.PDBEvents
res2	Bio.PDB.EventParser.PDBEvents
RESID
1 (Type/Class)	Bio.PDB.EventParser.PDBEvents
2 (Data Constructor)	Bio.PDB.EventParser.PDBEvents
resid	Bio.PDB.EventParser.PDBEvents
Residue
1 (Type/Class)	Bio.PDB.Structure, Bio.PDB
2 (Data Constructor)	Bio.PDB.Structure, Bio.PDB
residue	Bio.PDB.EventParser.PDBEvents
residues
1 (Function)	Bio.PDB.EventParser.PDBEvents
2 (Function)	Bio.PDB.Structure, Bio.PDB
residueVectorSize	Bio.PDB.Structure.List
resins	Bio.PDB.EventParser.PDBEvents
resList	Bio.PDB.EventParser.PDBEvents
resName	Bio.PDB.Structure, Bio.PDB
resname	Bio.PDB.EventParser.PDBEvents
resname2fastacode	Bio.PDB.Fasta, Bio.PDB
resSeq	Bio.PDB.Structure, Bio.PDB
restype	Bio.PDB.EventParser.PDBEvents
REVDAT	Bio.PDB.EventParser.PDBEvents
SCALEn	Bio.PDB.EventParser.PDBEvents
segid
1 (Function)	Bio.PDB.EventParser.PDBEvents
2 (Function)	Bio.PDB.Structure, Bio.PDB
sense	Bio.PDB.EventParser.PDBEvents
SEQADV	Bio.PDB.EventParser.PDBEvents
seqDbAccCode	Bio.PDB.EventParser.PDBEvents
seqDbIdCode	Bio.PDB.EventParser.PDBEvents
seqDbName	Bio.PDB.EventParser.PDBEvents
seqNum	Bio.PDB.EventParser.PDBEvents
SEQRES	Bio.PDB.EventParser.PDBEvents
serial	Bio.PDB.EventParser.PDBEvents
SHEET	Bio.PDB.EventParser.PDBEvents
sheetId	Bio.PDB.EventParser.PDBEvents
showExpMethod	Bio.PDB.EventParser.ExperimentalMethods
SIGATM	Bio.PDB.EventParser.PDBEvents
SIGUIJ	Bio.PDB.EventParser.PDBEvents
singleton	Bio.PDB.Structure.List
SITE	Bio.PDB.EventParser.PDBEvents
siteid	Bio.PDB.EventParser.PDBEvents
SLTBRG	Bio.PDB.EventParser.PDBEvents
SolidStateNMR	Bio.PDB.EventParser.ExperimentalMethods, Bio.PDB.EventParser.PDBEvents
SolutionNMR	Bio.PDB.EventParser.ExperimentalMethods, Bio.PDB.EventParser.PDBEvents
SolutionScattering	Bio.PDB.EventParser.ExperimentalMethods, Bio.PDB.EventParser.PDBEvents
SOURCE	Bio.PDB.EventParser.PDBEvents
spcGrp	Bio.PDB.EventParser.PDBEvents
SPLIT	Bio.PDB.EventParser.PDBEvents
SPRSDE	Bio.PDB.EventParser.PDBEvents
SSBOND	Bio.PDB.EventParser.PDBEvents
stdRes	Bio.PDB.EventParser.PDBEvents
strandId	Bio.PDB.EventParser.PDBEvents
StrandSenseT	Bio.PDB.EventParser.StrandSense, Bio.PDB.EventParser.PDBEvents
String	Bio.PDB.EventParser.PDBEvents, Bio.PDB.Structure
Structure
1 (Type/Class)	Bio.PDB.Structure, Bio.PDB
2 (Data Constructor)	Bio.PDB.Structure, Bio.PDB
symOp1	Bio.PDB.EventParser.PDBEvents
symop1	Bio.PDB.EventParser.PDBEvents
symOp2	Bio.PDB.EventParser.PDBEvents
symop2	Bio.PDB.EventParser.PDBEvents
t	Bio.PDB.EventParser.PDBEvents
tail	Bio.PDB.Structure.List
tempLength	Bio.PDB.Structure.List
TempList	Bio.PDB.Structure.List
TER	Bio.PDB.EventParser.PDBEvents
text	Bio.PDB.EventParser.PDBEvents
this	Bio.PDB.EventParser.PDBEvents
TITLE	Bio.PDB.EventParser.PDBEvents
title	Bio.PDB.EventParser.PDBEvents
tokens	Bio.PDB.EventParser.PDBEvents
toList	Bio.PDB.Structure.List
TVECT	Bio.PDB.EventParser.PDBEvents
unpackVector3	Bio.PDB.Structure.Vector
u_1_1	Bio.PDB.EventParser.PDBEvents
u_1_2	Bio.PDB.EventParser.PDBEvents
u_1_3	Bio.PDB.EventParser.PDBEvents
u_2_2	Bio.PDB.EventParser.PDBEvents
u_2_3	Bio.PDB.EventParser.PDBEvents
u_3_3	Bio.PDB.EventParser.PDBEvents
v3x	Bio.PDB.Structure.Vector, Bio.PDB.EventParser.PDBEvents
v3y	Bio.PDB.Structure.Vector, Bio.PDB.EventParser.PDBEvents
v3z	Bio.PDB.Structure.Vector, Bio.PDB.EventParser.PDBEvents
vanDerWaalsRadius	Bio.PDB.Structure.Elements, Bio.PDB
vdihedral	Bio.PDB.Structure.Vector, Bio.PDB.Structure
vdot	Bio.PDB.Structure.Vector, Bio.PDB.Structure
vec	Bio.PDB.EventParser.PDBEvents
Vector3
1 (Data Constructor)	Bio.PDB.Structure.Vector, Bio.PDB.EventParser.PDBEvents
2 (Type/Class)	Bio.PDB.Structure.Vector, Bio.PDB.EventParser.PDBEvents
vimap	Bio.PDB.Structure.List
vmap	Bio.PDB.Structure.Vector
vnorm	Bio.PDB.Structure.Vector, Bio.PDB.Structure, Bio.PDB
vnormalise	Bio.PDB.Structure.Vector
vperpend	Bio.PDB.Structure.Vector, Bio.PDB.Structure
vperpends	Bio.PDB.Structure.Vector, Bio.PDB.Structure
vproj	Bio.PDB.Structure.Vector, Bio.PDB.Structure
vzip	Bio.PDB.Structure.Vector
write
1 (Function)	Bio.PDB.StructurePrinter
2 (Function)	Bio.PDB.IO, Bio.PDB
writeFile	Bio.PDB.IO.OpenAnyFile
XRayDiffraction	Bio.PDB.EventParser.ExperimentalMethods, Bio.PDB.EventParser.PDBEvents
zValue	Bio.PDB.EventParser.PDBEvents
\|*	Bio.PDB.Structure.Vector, Bio.PDB.Structure, Bio.PDB