h)sR      !"#$%&'()*+,-./0123456789:;<=>?@ABCDEFGHIJKLMNOPQRSTUVWXYZ[\]^_`abcdefghijklmnopqrstuvwxyz{|}~                                                                                         !"#$%&'()*+,-./01234567890.5.0.2:(c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;/ hs-samtoolscCsSiIf% of the last optional field (type B).See section 1.5 of the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation. hs-samtoolscCsSiI&f of the last optional field (type B).See section 1.5 of the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation.  hs-samtoolscCsSi'If of the last optional field (type B).See section 1.5 of the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation. hs-samtoolscCsS(iIf of the last optional field (type B).See section 1.5 of the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation. hs-samtoolscCs)SiIf of the last optional field (type B).See section 1.5 of the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation. hs-samtoolscC*sSiIf of the last optional field (type B).See section 1.5 of the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation. hs-samtoolsc+CsSiIf of the last optional field (type B).See section 1.5 of the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation.# hs-samtoolsCustom SAM (version 1.6) SAM_V1_6_Alignment_BOPT data type.See section 1.5 of the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation.,#$%&'()*+ !"  ,#$%&'()*+ !"  (c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;"C hs-samtoolsCustom SAM (version 1.6) SAM_V1_6_Alignment data type.See section 1.4 and 1.5 of the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation.E hs-samtoolsQuery template NAME. reads/segments having identical QNAME are regarded to come from the same template. A QNAME @*@ indicates the information is unavailable. In a SAM file, a read may occupy multiple alignment lines, when its alignment is chimeric or when multiple mappings are given.F hs-samtoolsCombination of bitwise FLAGs.G hs-samtoolsReference sequence NAME of the alignment. If @SQ header lines are present, RNAME (if not @*@) must be present in one of the SQ-SN tag. An unmapped segment without coordinate has a @*@ at this field. However, an unmapped segment may also have an ordinary coordinate such that it can be placed at a desired position after sorting. If RNAME is @*@, no assumptions can be made about POS and CIGAR.H hs-samtools1-based leftmost mapping POSition of the first CIGAR operation that @consumes@ a reference base. The first base in a reference sequence has coordinate 1. POS is set as 0 for an unmapped read without coordinate. If POS is 0, no assumptions can be made about RNAME and CIGAR.I hs-samtoolsMAPping Quality. It equals D10 log10 Pr{mapping position is wrong}, rounded to the nearest integer. A value 255 indicates that the mapping quality is not available.J hs-samtools&CIGAR string (set @*@ if unavailable).K hs-samtoolsReference sequence name of the primary alignment of the NEXT read in the template. For the last read, the next read is the first read in the template. If @SQ header lines are present, RNEXT (if not @*@ or @=@) must be present in one of the SQ-SN tag. This field is set as @*@ when the information is unavailable, and set as @=@ if RNEXT is identical RNAME. If not @=@ and the next read in the template has one primary mapping (see also bit 0x100 in FLAG), this field is identical to RNAME at the primary line of the next read. If RNEXT is @*@, no assumptions can be made on PNEXT and bit 0x20.L hs-samtools1-based Position of the primary alignment of the NEXT read in the template. Set as 0 when the information is unavailable. This field equals POS at the primary line of the next read. If PNEXT is 0, no assumptions can be made on RNEXT and bit 0x20.M hs-samtoolssigned observed Template LENgth. For primary reads where the primary alignments of all reads in the template are mapped to the same reference sequence, the absolute value of TLEN equals the distance between the mapped end of the template and the mapped start of the template, inclusively (i.e., end D start + 1). Note that mapped base is defined to be one that aligns to the reference as described by CIGAR, hence excludes soft-clipped bases. The TLEN field is positive for the leftmost segment of the template, negative for the rightmost, and the sign for any middle segment is undefined. If segments cover the same coordinates then the choice of which is leftmost and rightmost is arbitrary, but the two ends must still have differing signs. It is set as 0 for a single-segment template or when the information is unavailable (e.g., when the first or last segment of a multi-segment template is unmapped or when the two are mapped to different reference sequences).N hs-samtoolssegment SEQuence. This field can be a @*@ when the sequence is not stored. If not a @*@, the length of the sequence must equal the sum of lengths of MIS=X operations in CIGAR. An @=@ denotes the base is identical to the reference base. No assumptions can be made on the letter cases.O hs-samtoolsASCII of base QUALity plus 33 (same as the quality string in the Sanger FASTQ format). A base quality is the phred-scaled base error probability which equals D10 log10 Pr{base is wrong}. This field can be a @*@ when quality is not stored. If not a @*@, SEQ must not be a @*@ and the length of the quality string ought to equal the length of SEQ.P hs-samtools!A - [!-~] - Printable characters.Q hs-samtools!i - [-+]?[0-9]+ - Signed integer.R hs-samtoolsf - [-+]?[0-9]*.?[0-9]+([eE][-+]?[0-9]+)? - Single-precision floating number.S hs-samtools0Z - [ !-~]* - Printable string, including space.T hs-samtools7H - ([0-9A-F][0-9A-F])* - Byte array in the Hex format.U hs-samtoolsB - [cCsSiIf]@(,[-+]?[0-9]*.?[0-9]+([eE][-+]?[0-9]+)?)* - Integer or numeric array.CDEFGHIJKLMNOPQRSTUCDEFGHIJKLMNOPQRSTU:(c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;#CUTSRQPONMLKJIHGFDE(c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;$X hs-samtoolsCustom SAM (version 1.6) SAM_V1_6_One_Line_Comment data type.See section 1.3 of the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation.XYZXYZ(c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;'V^ hs-samtools SS tag for SAM_V1_6_File_Level_Metadata.b hs-samtools GO tag for SAM_V1_6_File_Level_Metadata.f hs-samtools SO tag for SAM_V1_6_File_Level_Metadata.j hs-samtools VN tag for SAM_V1_6_File_Level_Metadata.n hs-samtoolsCustom SAM (version 1.6) SAM_V1_6_File_Level_Metadata data type.See section 1.3 of the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation.nopqrsjklmfghibcde^_`anopqrsjklmfghibcde^_`a(c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;* hs-samtools VN tag for SAM_V1_6_Program. hs-samtools DS tag for SAM_V1_6_Program. hs-samtools PP tag for SAM_V1_6_Program. hs-samtools CL tag for SAM_V1_6_Program. hs-samtools PN tag for SAM_V1_6_Program. hs-samtools ID tag for SAM_V1_6_Program. hs-samtoolsCustom SAM (version 1.6) SAM_V1_6_Program data type.See section 1.3 of the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation.  (c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;/  hs-samtools SM tag for SAM_V1_6_Read_Group. hs-samtools PU tag for SAM_V1_6_Read_Group. hs-samtools PM tag for SAM_V1_6_Read_Group. hs-samtools PL tag for SAM_V1_6_Read_Group. hs-samtools PI tag for SAM_V1_6_Read_Group. hs-samtools PG tag for SAM_V1_6_Read_Group. hs-samtools LB tag for SAM_V1_6_Read_Group. hs-samtools KS tag for SAM_V1_6_Read_Group. hs-samtools FO tag for SAM_V1_6_Read_Group. hs-samtools DT tag for SAM_V1_6_Read_Group. hs-samtools DS tag for SAM_V1_6_Read_Group. hs-samtools CN tag for SAM_V1_6_Read_Group. hs-samtools BC tag for SAM_V1_6_Read_Group. hs-samtools ID tag for SAM_V1_6_Read_Group. hs-samtoolsCustom SAM (version 1.6) SAM_V1_6_Read_Group data type.See section 1.3 of the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation.(c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;4  hs-samtools UR tag for &SAM_V1_6_Reference_Sequence_Dictionary. hs-samtools TP tag for &SAM_V1_6_Reference_Sequence_Dictionary. hs-samtools SP tag for &SAM_V1_6_Reference_Sequence_Dictionary. hs-samtools M5 tag for &SAM_V1_6_Reference_Sequence_Dictionary. hs-samtools DS tag for &SAM_V1_6_Reference_Sequence_Dictionary. hs-samtools AS tag for &SAM_V1_6_Reference_Sequence_Dictionary. hs-samtools AN tag for &SAM_V1_6_Reference_Sequence_Dictionary. hs-samtools AH tag for &SAM_V1_6_Reference_Sequence_Dictionary. hs-samtools LN tag for &SAM_V1_6_Reference_Sequence_Dictionary. hs-samtools SN tag for &SAM_V1_6_Reference_Sequence_Dictionary. hs-samtoolsCustom SAM (version 1.6) &SAM_V1_6_Reference_Sequence_Dictionary data type.See section 1.3 of the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation.44;(c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;5XYZnsrqopjmklfighbecd^a_`(c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;: hs-samtoolsCustom SAM_V1_6 (SAM version 1.6) data type.See the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation. hs-samtoolsFile-level metadata. Optional. If present, there must be only one @HD line and it must be the first line of the file.  hs-samtoolsReference sequence dictionary. The order of @SQ lines defines the alignment sorting order. hs-samtools7Read group. Unordered multiple @RG lines are allowed. hs-samtoolsProgram. hs-samtoolsOne-line text comment. Unordered multiple @CO lines are allowed. UTF-8 encoding may be used. hs-samtools7The alignment section (mandatory and optional fields). (c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;V@ hs-samtoolsCustom SAM_V1_6- (SAM version 1.6) error data type. See the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation. hs-samtools2HD tag not in accepted format (only important if HD tag is present). hs-samtools7VN tag missing (only important if @HD tag is present). hs-samtoolsVN tag not in accepted format (only important if @HD tag is present). hs-samtoolsVN value not in accepted format (only important if @HD tag is present). hs-samtoolsSorting order tag not in accepted format (only important if @HD tag is present). hs-samtoolsSorting order invalid value (only important if @HD tag is present). hs-samtoolsGrouping of alignments no in accepted format (only important if @HD tag is present). hs-samtoolsGrouping of Alignments invalid value (only important if @HD tag is present). hs-samtoolsSubsorting order tag not in accepted format (only important if @HD tag is present). hs-samtoolsSubsorting order of alignments not in accepted format (only if @HD tag is present. hs-samtools7SN tag missing (only important if @SQ tag is present). hs-samtoolsReference Sequence Name not in accepted format (only important if @SQ tag is present. hs-samtoolsReference Sequence Name invalid value (only important if @SQ tag is present). hs-samtools7LN tag missing (only important if @SQ tag is present). hs-samtoolsReference Sequence Length not in accepted format (only important if @SQ tag is present. hs-samtoolsReference Sequence Length invalid value (only important if @SQ tag is present). hs-samtoolsAlternative locus not in accepted format (only important if @SQ tag is present). hs-samtoolsAlternative Reference Sequence Names not in accepted format (only important if @SQ tag is present). hs-samtoolsAlternative Reference Sequence Names invalid value (only important if @SQ tag is present). hs-samtoolsGenome Assembly Identifier not in accepted format (only important if @SQ tag is present). hs-samtoolsDescription not in accepted format (only important if @SQ tag is present). hs-samtoolsMD5 checksum not in accepted format (only important if @SQ tag is present). hs-samtoolsSpecies not in accepted format (only important if @SQ tag is present). hs-samtoolsMolecule topology not in accepted format (only important if @SQ tag is present). hs-samtoolsMolecule topology invalid value (only important if @SQ tag is present). hs-samtoolsURI not in accepted format (only important if @SQ tag is present). hs-samtoolsID tag not accepted format (only important if @RG tag is present). hs-samtools:ID tag is missing (only important if @RG tag is present). hs-samtoolsBC tag not in accepted format (only important if @RG tag is present). hs-samtoolsCN tag not in accepted format (only important if @RG tag is present). hs-samtoolsDS tag not in accepted format (only important if @RG tag is present). hs-samtoolsDT tag not in accepted format (only important if @RG tag is present). hs-samtoolsFO tag not in accepted format (only important if @RG tag is present). hs-samtoolsKS tag not in accepted format (only important if @RG tag is present). hs-samtoolsLB tag not in accepted format (only important if @RG tag is present). hs-samtoolsPG tag not in accepted format (only important if @RG tag is present). hs-samtoolsPI tag not in accepted format (only important if @RG tag is present). hs-samtoolsPL tag not in accepted format (only important if @RG tag is present). hs-samtoolsPM tag not in accepted format (only important if @RG tag is present). hs-samtoolsPU tag not in accepted format (only important if @RG tag is present). hs-samtoolsSM tag not in accepted format (only important if @RG tag is present). hs-samtoolsRG tag not in accepted format. hs-samtoolsID tag not in accepted format (only important if @PG tag is present). hs-samtoolsPN tag not in accepted format (only important if @PG tag is present). hs-samtoolsCL tag not in accepted format (only important if @PG tag is present). hs-samtoolsPP tag not in accepted format (only important if @PG tag is present). hs-samtoolsDS tag not in accepted format (only important if @PG tag is present). hs-samtoolsVN tag not in accepted format (only important if @PG tag is present). hs-samtoolsPG tag not in accepted format. hs-samtoolsCO tag not in accepted format. hs-samtools2QNAME of alignment section not in accepted format. hs-samtools1FLAG of alignment section not in accepted format. hs-samtools2RNAME of alignment section not in accepted format. hs-samtools0POS of alignment section not in accepted format. hs-samtools1MAPQ of alignment section not in accepted format. hs-samtools2CIGAR of alignment section not in accepted format. hs-samtools2RNEXT of alignment section not in accepted format. hs-samtools2PNEXT of alignment section not in accepted format. hs-samtools2TLEN of alignment section not in accpepted format. hs-samtools0SEQ of alignment section not in accepted format. hs-samtools1QUAL of alignment section not in accepted format. hs-samtools9AOPT tag of the alignment section not in accepted format. hs-samtools:AOPT type of the alignment section not in accepted format. hs-samtools;AOPT value of the alignment section not in accepted format. hs-samtools9IOPT tag of the alignment section not in accepted format. hs-samtools:IOPT type of the alignment section not in accepted format. hs-samtools;IOPT value of the alignment section not in accepted format. hs-samtools9FOPT tag of the alignment section not in accepted format. hs-samtools:FOPT type of the alignment section not in accepted format. hs-samtools;FOPT value of the alignment section not in accepted format. hs-samtools9ZOPT tag of the alignment section not in accepted format. hs-samtools:ZOPT type of the alignment section not in accepted format. hs-samtools;ZOPT value of the alignment section not in accepted format. hs-samtools9HOPT tag of the alignment section not in accepted format. hs-samtools:HOPT type of the alignment section not in accepted format. hs-samtools;HOPT value of the alignment section not in accepted format. hs-samtools9BOPT tag of the alignment section not in accepted format. hs-samtools:BOPT type of the alignment section not in accepted format. hs-samtoolsBOPT value type of the alignment section not in accepted format. hs-samtoolsBOPT value data of the alignment section not in accepted format. (c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;X hs-samtoolsDefines a parser for the optional aopt field of alignment section of the SAM v1.6 file format.See the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation. (c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;ZL hs-samtoolsDefines a parser for the optional bopt field of alignment section of the SAM v1.6 file format.See the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation. (c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;[ hs-samtoolsDefines a parser for the optional fopt field of alignment section of the SAM v1.6 file format.See the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation. (c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;] hs-samtoolsDefines a parser for the optional hopt field of alignment section of the SAM v1.6 file format.See the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation.(c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;^{ hs-samtoolsDefines a parser for the optional iopt field of alignment section of the SAM v1.6 file format.See the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation.(c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;_ hs-samtoolsDefines a parser for the optional zopt field of alignment section of the SAM v1.6 file format.See the  -http://samtools.github.io/hts-specs/SAMv1.pdfSAM v1.6 specification documentation.(c) Matthew Mosior 2023 BSD-stylemattm.github@gmail.comportable Safe-Inferred"#%&6;a hs-samtools?@@ABCDDEFGHHIJKLLMNOPPQRSTTUVWXXYZ[\]^_`abcdefghijklmnopqrstuvwwxyz{|}~                                                                                         !"#$%&'()*+,-./012345678,7888hs-samtools-0.5.0.2-inplace"Data.SAM.Version1_6.Alignment.BOPT"Data.SAM.Version1_6.Alignment.BaseData.SAM.Version1_6.Header.COData.SAM.Version1_6.Header.HDData.SAM.Version1_6.Header.PGData.SAM.Version1_6.Header.RGData.SAM.Version1_6.Header.SQData.SAM.Version1_6.BaseData.SAM.Version1_6.Read.Error.Data.SAM.Version1_6.Read.Parser.Alignment.AOPT.Data.SAM.Version1_6.Read.Parser.Alignment.BOPT.Data.SAM.Version1_6.Read.Parser.Alignment.FOPT.Data.SAM.Version1_6.Read.Parser.Alignment.HOPT.Data.SAM.Version1_6.Read.Parser.Alignment.IOPT.Data.SAM.Version1_6.Read.Parser.Alignment.ZOPT.Data.SAM.Version1_6.Read.Parser.Alignment.Base.Data.SAM.Version1_6.Read.Parser.Header.CO.Base,Data.SAM.Version1_6.Read.Parser.Header.HD.GO,Data.SAM.Version1_6.Read.Parser.Header.HD.SO,Data.SAM.Version1_6.Read.Parser.Header.HD.SS,Data.SAM.Version1_6.Read.Parser.Header.HD.VN.Data.SAM.Version1_6.Read.Parser.Header.HD.Base,Data.SAM.Version1_6.Read.Parser.Header.PG.CL,Data.SAM.Version1_6.Read.Parser.Header.PG.DS,Data.SAM.Version1_6.Read.Parser.Header.PG.ID,Data.SAM.Version1_6.Read.Parser.Header.PG.PN,Data.SAM.Version1_6.Read.Parser.Header.PG.PP,Data.SAM.Version1_6.Read.Parser.Header.PG.VN.Data.SAM.Version1_6.Read.Parser.Header.PG.Base,Data.SAM.Version1_6.Read.Parser.Header.RG.BC,Data.SAM.Version1_6.Read.Parser.Header.RG.CN,Data.SAM.Version1_6.Read.Parser.Header.RG.DS,Data.SAM.Version1_6.Read.Parser.Header.RG.DT,Data.SAM.Version1_6.Read.Parser.Header.RG.FO,Data.SAM.Version1_6.Read.Parser.Header.RG.ID,Data.SAM.Version1_6.Read.Parser.Header.RG.KS,Data.SAM.Version1_6.Read.Parser.Header.RG.LB,Data.SAM.Version1_6.Read.Parser.Header.RG.PG,Data.SAM.Version1_6.Read.Parser.Header.RG.PI,Data.SAM.Version1_6.Read.Parser.Header.RG.PL,Data.SAM.Version1_6.Read.Parser.Header.RG.PM,Data.SAM.Version1_6.Read.Parser.Header.RG.PU,Data.SAM.Version1_6.Read.Parser.Header.RG.SM.Data.SAM.Version1_6.Read.Parser.Header.RG.Base,Data.SAM.Version1_6.Read.Parser.Header.SQ.AH,Data.SAM.Version1_6.Read.Parser.Header.SQ.AN,Data.SAM.Version1_6.Read.Parser.Header.SQ.AS,Data.SAM.Version1_6.Read.Parser.Header.SQ.DS,Data.SAM.Version1_6.Read.Parser.Header.SQ.LN,Data.SAM.Version1_6.Read.Parser.Header.SQ.M5,Data.SAM.Version1_6.Read.Parser.Header.SQ.SN,Data.SAM.Version1_6.Read.Parser.Header.SQ.SP,Data.SAM.Version1_6.Read.Parser.Header.SQ.TP,Data.SAM.Version1_6.Read.Parser.Header.SQ.UR.Data.SAM.Version1_6.Read.Parser.Header.SQ.BaseData.SAM.Version1_6.Read.Base hs-samtoolsData.SAM.Version1_6.AlignmentData.SAM.Version1_6.HeaderSAM_V1_6_Alignment_BOPT_Float!sam_v1_6_alignment_bopt_float_tag"sam_v1_6_alignment_bopt_float_type#sam_v1_6_alignment_bopt_float_valueSAM_V1_6_Alignment_BOPT_Word32"sam_v1_6_alignment_bopt_word32_tag#sam_v1_6_alignment_bopt_word32_type$sam_v1_6_alignment_bopt_word32_valueSAM_V1_6_Alignment_BOPT_Int32!sam_v1_6_alignment_bopt_int32_tag"sam_v1_6_alignment_bopt_int32_type#sam_v1_6_alignment_bopt_int32_valueSAM_V1_6_Alignment_BOPT_Word16"sam_v1_6_alignment_bopt_word16_tag#sam_v1_6_alignment_bopt_word16_type$sam_v1_6_alignment_bopt_word16_valueSAM_V1_6_Alignment_BOPT_Int16!sam_v1_6_alignment_bopt_int16_tag"sam_v1_6_alignment_bopt_int16_type#sam_v1_6_alignment_bopt_int16_valueSAM_V1_6_Alignment_BOPT_Word8!sam_v1_6_alignment_bopt_word8_tag"sam_v1_6_alignment_bopt_word8_type#sam_v1_6_alignment_bopt_word8_valueSAM_V1_6_Alignment_BOPT_Int8 sam_v1_6_alignment_bopt_int8_tag!sam_v1_6_alignment_bopt_int8_type"sam_v1_6_alignment_bopt_int8_valueSAM_V1_6_Alignment_BOPTsam_v1_6_alignment_bopt_int8sam_v1_6_alignment_bopt_word8sam_v1_6_alignment_bopt_int16sam_v1_6_alignment_bopt_word16sam_v1_6_alignment_bopt_int32sam_v1_6_alignment_bopt_word32sam_v1_6_alignment_bopt_float"$fShowSAM_V1_6_Alignment_BOPT_Int8 $fEqSAM_V1_6_Alignment_BOPT_Int8#$fShowSAM_V1_6_Alignment_BOPT_Word8!$fEqSAM_V1_6_Alignment_BOPT_Word8#$fShowSAM_V1_6_Alignment_BOPT_Int16!$fEqSAM_V1_6_Alignment_BOPT_Int16$$fShowSAM_V1_6_Alignment_BOPT_Word16"$fEqSAM_V1_6_Alignment_BOPT_Word16#$fShowSAM_V1_6_Alignment_BOPT_Int32!$fEqSAM_V1_6_Alignment_BOPT_Int32$$fShowSAM_V1_6_Alignment_BOPT_Word32"$fEqSAM_V1_6_Alignment_BOPT_Word32#$fShowSAM_V1_6_Alignment_BOPT_Float!$fEqSAM_V1_6_Alignment_BOPT_Float$fShowSAM_V1_6_Alignment_BOPT $fGenericSAM_V1_6_Alignment_BOPT&$fGenericSAM_V1_6_Alignment_BOPT_Float'$fGenericSAM_V1_6_Alignment_BOPT_Word32&$fGenericSAM_V1_6_Alignment_BOPT_Int32'$fGenericSAM_V1_6_Alignment_BOPT_Word16&$fGenericSAM_V1_6_Alignment_BOPT_Int16&$fGenericSAM_V1_6_Alignment_BOPT_Word8%$fGenericSAM_V1_6_Alignment_BOPT_Int8SAM_V1_6_Alignmentsam_v1_6_alignment_qnamesam_v1_6_alignment_flagsam_v1_6_alignment_rnamesam_v1_6_alignment_possam_v1_6_alignment_mapqsam_v1_6_alignment_cigarsam_v1_6_alignment_rnextsam_v1_6_alignment_pnextsam_v1_6_alignment_tlensam_v1_6_alignment_seqsam_v1_6_alignment_qualsam_v1_6_alignment_aoptsam_v1_6_alignment_ioptsam_v1_6_alignment_foptsam_v1_6_alignment_zoptsam_v1_6_alignment_hoptsam_v1_6_alignment_bopt$fShowSAM_V1_6_Alignment$fGenericSAM_V1_6_AlignmentSAM_V1_6_One_Line_Commentsam_v1_6_one_line_comment_value$fShowSAM_V1_6_One_Line_Comment$fEqSAM_V1_6_One_Line_Comment"$fGenericSAM_V1_6_One_Line_Comment-SAM_V1_6_File_Level_Metadata_SubSorting_Order1sam_v1_6_file_level_metadata_subsorting_order_tag3sam_v1_6_file_level_metadata_subsorting_order_value/SAM_V1_6_File_Level_Metadata_Alignment_Grouping3sam_v1_6_file_level_metadata_alignment_grouping_tag5sam_v1_6_file_level_metadata_alignment_grouping_value*SAM_V1_6_File_Level_Metadata_Sorting_Order.sam_v1_6_file_level_metadata_sorting_order_tag0sam_v1_6_file_level_metadata_sorting_order_value+SAM_V1_6_File_Level_Metadata_Format_Version/sam_v1_6_file_level_metadata_format_version_tag1sam_v1_6_file_level_metadata_format_version_valueSAM_V1_6_File_Level_Metadata+sam_v1_6_file_level_metadata_format_version*sam_v1_6_file_level_metadata_sorting_order/sam_v1_6_file_level_metadata_alignment_grouping-sam_v1_6_file_level_metadata_subsorting_order1$fShowSAM_V1_6_File_Level_Metadata_Format_Version/$fEqSAM_V1_6_File_Level_Metadata_Format_Version0$fShowSAM_V1_6_File_Level_Metadata_Sorting_Order.$fEqSAM_V1_6_File_Level_Metadata_Sorting_Order5$fShowSAM_V1_6_File_Level_Metadata_Alignment_Grouping3$fEqSAM_V1_6_File_Level_Metadata_Alignment_Grouping3$fShowSAM_V1_6_File_Level_Metadata_SubSorting_Order1$fEqSAM_V1_6_File_Level_Metadata_SubSorting_Order"$fShowSAM_V1_6_File_Level_Metadata%$fGenericSAM_V1_6_File_Level_Metadata6$fGenericSAM_V1_6_File_Level_Metadata_SubSorting_Order8$fGenericSAM_V1_6_File_Level_Metadata_Alignment_Grouping3$fGenericSAM_V1_6_File_Level_Metadata_Sorting_Order4$fGenericSAM_V1_6_File_Level_Metadata_Format_VersionSAM_V1_6_Program_Versionsam_v1_6_program_version_tagsam_v1_6_program_version_valueSAM_V1_6_Program_Description sam_v1_6_program_description_tag"sam_v1_6_program_description_valueSAM_V1_6_Program_Previous_PG_ID#sam_v1_6_program_previous_pg_id_tag%sam_v1_6_program_previous_pg_id_valueSAM_V1_6_Program_Command_Line!sam_v1_6_program_command_line_tag#sam_v1_6_program_command_line_valueSAM_V1_6_Program_Namesam_v1_6_program_name_tagsam_v1_6_program_name_value"SAM_V1_6_Program_Record_Identifier&sam_v1_6_program_record_identifier_tag(sam_v1_6_program_record_identifier_valueSAM_V1_6_Program"sam_v1_6_program_record_identifiersam_v1_6_program_namesam_v1_6_program_command_linesam_v1_6_program_previous_pg_idsam_v1_6_program_descriptionsam_v1_6_program_version($fShowSAM_V1_6_Program_Record_Identifier&$fEqSAM_V1_6_Program_Record_Identifier$fShowSAM_V1_6_Program_Name$fEqSAM_V1_6_Program_Name#$fShowSAM_V1_6_Program_Command_Line!$fEqSAM_V1_6_Program_Command_Line%$fShowSAM_V1_6_Program_Previous_PG_ID#$fEqSAM_V1_6_Program_Previous_PG_ID"$fShowSAM_V1_6_Program_Description $fEqSAM_V1_6_Program_Description$fShowSAM_V1_6_Program_Version$fEqSAM_V1_6_Program_Version$fShowSAM_V1_6_Program$fGenericSAM_V1_6_Program!$fGenericSAM_V1_6_Program_Version%$fGenericSAM_V1_6_Program_Description($fGenericSAM_V1_6_Program_Previous_PG_ID&$fGenericSAM_V1_6_Program_Command_Line$fGenericSAM_V1_6_Program_Name+$fGenericSAM_V1_6_Program_Record_IdentifierSAM_V1_6_Read_Group_Samplesam_v1_6_read_group_sample_tag sam_v1_6_read_group_sample_value!SAM_V1_6_Read_Group_Platform_Unit%sam_v1_6_read_group_platform_unit_tag'sam_v1_6_read_group_platform_unit_value"SAM_V1_6_Read_Group_Platform_Model&sam_v1_6_read_group_platform_model_tag(sam_v1_6_read_group_platform_model_valueSAM_V1_6_Read_Group_Platform sam_v1_6_read_group_platform_tag"sam_v1_6_read_group_platform_value0SAM_V1_6_Read_Group_Predicted_Median_Insert_Size4sam_v1_6_read_group_predicted_median_insert_size_tag6sam_v1_6_read_group_predicted_median_insert_size_valueSAM_V1_6_Read_Group_Programs sam_v1_6_read_group_programs_tag"sam_v1_6_read_group_programs_valueSAM_V1_6_Read_Group_Librarysam_v1_6_read_group_library_tag!sam_v1_6_read_group_library_value SAM_V1_6_Read_Group_Key_Sequence$sam_v1_6_read_group_key_sequence_tag&sam_v1_6_read_group_key_sequence_valueSAM_V1_6_Read_Group_Flow_Order"sam_v1_6_read_group_flow_order_tag$sam_v1_6_read_group_flow_order_valueSAM_V1_6_Read_Group_Run_Date sam_v1_6_read_group_run_date_tag"sam_v1_6_read_group_run_date_valueSAM_V1_6_Read_Group_Description#sam_v1_6_read_group_description_tag%sam_v1_6_read_group_description_value%SAM_V1_6_Read_Group_Sequencing_Center)sam_v1_6_read_group_sequencing_center_tag+sam_v1_6_read_group_sequencing_center_value$SAM_V1_6_Read_Group_Barcode_Sequence(sam_v1_6_read_group_barcode_sequence_tag*sam_v1_6_read_group_barcode_sequence_valueSAM_V1_6_Read_Group_Identifier"sam_v1_6_read_group_identifier_tag$sam_v1_6_read_group_identifier_valueSAM_V1_6_Read_Groupsam_v1_6_read_group_identifer$sam_v1_6_read_group_barcode_sequence%sam_v1_6_read_group_sequencing_centersam_v1_6_read_group_descriptionsam_v1_6_read_group_run_datesam_v1_6_read_group_flow_order sam_v1_6_read_group_key_sequencesam_v1_6_read_group_librarysam_v1_6_read_group_programs0sam_v1_6_read_group_predicted_median_insert_sizesam_v1_6_read_group_platform"sam_v1_6_read_group_platform_model!sam_v1_6_read_group_platform_unitsam_v1_6_read_group_sample$$fShowSAM_V1_6_Read_Group_Identifier"$fEqSAM_V1_6_Read_Group_Identifier*$fShowSAM_V1_6_Read_Group_Barcode_Sequence($fEqSAM_V1_6_Read_Group_Barcode_Sequence+$fShowSAM_V1_6_Read_Group_Sequencing_Center)$fEqSAM_V1_6_Read_Group_Sequencing_Center%$fShowSAM_V1_6_Read_Group_Description#$fEqSAM_V1_6_Read_Group_Description"$fShowSAM_V1_6_Read_Group_Run_Date $fEqSAM_V1_6_Read_Group_Run_Date$$fShowSAM_V1_6_Read_Group_Flow_Order"$fEqSAM_V1_6_Read_Group_Flow_Order&$fShowSAM_V1_6_Read_Group_Key_Sequence$$fEqSAM_V1_6_Read_Group_Key_Sequence!$fShowSAM_V1_6_Read_Group_Library$fEqSAM_V1_6_Read_Group_Library"$fShowSAM_V1_6_Read_Group_Programs $fEqSAM_V1_6_Read_Group_Programs6$fShowSAM_V1_6_Read_Group_Predicted_Median_Insert_Size4$fEqSAM_V1_6_Read_Group_Predicted_Median_Insert_Size"$fShowSAM_V1_6_Read_Group_Platform $fEqSAM_V1_6_Read_Group_Platform($fShowSAM_V1_6_Read_Group_Platform_Model&$fEqSAM_V1_6_Read_Group_Platform_Model'$fShowSAM_V1_6_Read_Group_Platform_Unit%$fEqSAM_V1_6_Read_Group_Platform_Unit $fShowSAM_V1_6_Read_Group_Sample$fEqSAM_V1_6_Read_Group_Sample$fShowSAM_V1_6_Read_Group#$fGenericSAM_V1_6_Read_Group_Sample*$fGenericSAM_V1_6_Read_Group_Platform_Unit+$fGenericSAM_V1_6_Read_Group_Platform_Model%$fGenericSAM_V1_6_Read_Group_Platform9$fGenericSAM_V1_6_Read_Group_Predicted_Median_Insert_Size%$fGenericSAM_V1_6_Read_Group_Programs$$fGenericSAM_V1_6_Read_Group_Library)$fGenericSAM_V1_6_Read_Group_Key_Sequence'$fGenericSAM_V1_6_Read_Group_Flow_Order%$fGenericSAM_V1_6_Read_Group_Run_Date($fGenericSAM_V1_6_Read_Group_Description.$fGenericSAM_V1_6_Read_Group_Sequencing_Center-$fGenericSAM_V1_6_Read_Group_Barcode_Sequence'$fGenericSAM_V1_6_Read_Group_Identifier*SAM_V1_6_Reference_Sequence_Dictionary_URI.sam_v1_6_reference_sequence_dictionary_uri_tag0sam_v1_6_reference_sequence_dictionary_uri_value8SAM_V1_6_Reference_Sequence_Dictionary_Molecule_Topologysam_v1_6_reference_sequence_dictionary_molecule_topology_value.SAM_V1_6_Reference_Sequence_Dictionary_Species2sam_v1_6_reference_sequence_dictionary_species_tag4sam_v1_6_reference_sequence_dictionary_species_value3SAM_V1_6_Reference_Sequence_Dictionary_MD5_Checksum7sam_v1_6_reference_sequence_dictionary_md5_checksum_tag9sam_v1_6_reference_sequence_dictionary_md5_checksum_value2SAM_V1_6_Reference_Sequence_Dictionary_Description6sam_v1_6_reference_sequence_dictionary_description_tag8sam_v1_6_reference_sequence_dictionary_description_valueSAM_V1_6_Reference_Sequence_Dictionary_Genome_Assembly_Identifiersam_v1_6_reference_sequence_dictionary_genome_assembly_identifier_tagsam_v1_6_reference_sequence_dictionary_genome_assembly_identifier_valueSAM_V1_6_Reference_Sequence_Dictionary_Alternative_Reference_Sequence_Namessam_v1_6_reference_sequence_dictionary_alternative_reference_sequence_names_tagsam_v1_6_reference_sequence_dictionary_alternative_reference_sequence_names_value8SAM_V1_6_Reference_Sequence_Dictionary_Alternative_Locussam_v1_6_reference_sequence_dictionary_alternative_locus_valueSAM_V1_6_Reference_Sequence_Dictionary_Reference_Sequence_Lengthsam_v1_6_reference_sequence_dictionary_reference_sequence_length_tagsam_v1_6_reference_sequence_dictionary_reference_sequence_length_value>SAM_V1_6_Reference_Sequence_Dictionary_Reference_Sequence_Namesam_v1_6_reference_sequence_dictionary_reference_sequence_name_tagsam_v1_6_reference_sequence_dictionary_reference_sequence_name_value&SAM_V1_6_Reference_Sequence_Dictionary>sam_v1_6_reference_sequence_dictionary_reference_sequence_namesam_v1_6_reference_sequence_dictionary_reference_sequence_lengthsam_v1_6_reference_sequence_dictionary_reference_alternative_locussam_v1_6_reference_sequence_dictionary_reference_alternative_reference_sequence_namessam_v1_6_reference_sequence_dictionary_genome_assembly_identifier2sam_v1_6_reference_sequence_dictionary_description3sam_v1_6_reference_sequence_dictionary_md5_checksum.sam_v1_6_reference_sequence_dictionary_species8sam_v1_6_reference_sequence_dictionary_molecule_topology*sam_v1_6_reference_sequence_dictionary_uri$fShowSAM_V1_6_Reference_Sequence_Dictionary_Reference_Sequence_Name$fEqSAM_V1_6_Reference_Sequence_Dictionary_Reference_Sequence_Name$fShowSAM_V1_6_Reference_Sequence_Dictionary_Reference_Sequence_Length$fEqSAM_V1_6_Reference_Sequence_Dictionary_Reference_Sequence_Length>$fShowSAM_V1_6_Reference_Sequence_Dictionary_Alternative_Locus<$fEqSAM_V1_6_Reference_Sequence_Dictionary_Alternative_Locus$fShowSAM_V1_6_Reference_Sequence_Dictionary_Alternative_Reference_Sequence_Names$fEqSAM_V1_6_Reference_Sequence_Dictionary_Alternative_Reference_Sequence_Names$fShowSAM_V1_6_Reference_Sequence_Dictionary_Genome_Assembly_Identifier$fEqSAM_V1_6_Reference_Sequence_Dictionary_Genome_Assembly_Identifier8$fShowSAM_V1_6_Reference_Sequence_Dictionary_Description6$fEqSAM_V1_6_Reference_Sequence_Dictionary_Description9$fShowSAM_V1_6_Reference_Sequence_Dictionary_MD5_Checksum7$fEqSAM_V1_6_Reference_Sequence_Dictionary_MD5_Checksum4$fShowSAM_V1_6_Reference_Sequence_Dictionary_Species2$fEqSAM_V1_6_Reference_Sequence_Dictionary_Species>$fShowSAM_V1_6_Reference_Sequence_Dictionary_Molecule_Topology<$fEqSAM_V1_6_Reference_Sequence_Dictionary_Molecule_Topology0$fShowSAM_V1_6_Reference_Sequence_Dictionary_URI.$fEqSAM_V1_6_Reference_Sequence_Dictionary_URI,$fShowSAM_V1_6_Reference_Sequence_Dictionary/$fGenericSAM_V1_6_Reference_Sequence_Dictionary3$fGenericSAM_V1_6_Reference_Sequence_Dictionary_URI$fGenericSAM_V1_6_Reference_Sequence_Dictionary_Molecule_Topology7$fGenericSAM_V1_6_Reference_Sequence_Dictionary_Species<$fGenericSAM_V1_6_Reference_Sequence_Dictionary_MD5_Checksum;$fGenericSAM_V1_6_Reference_Sequence_Dictionary_Description$fGenericSAM_V1_6_Reference_Sequence_Dictionary_Genome_Assembly_Identifier$fGenericSAM_V1_6_Reference_Sequence_Dictionary_Alternative_Reference_Sequence_Names$fGenericSAM_V1_6_Reference_Sequence_Dictionary_Alternative_Locus$fGenericSAM_V1_6_Reference_Sequence_Dictionary_Reference_Sequence_Length$fGenericSAM_V1_6_Reference_Sequence_Dictionary_Reference_Sequence_NameSAM_V1_6sam_v1_6_file_level_metadata&sam_v1_6_reference_sequence_dictionarysam_v1_6_read_groupsam_v1_6_programsam_v1_6_one_line_commentsam_v1_6_alignment$fShowSAM_V1_6$fGenericSAM_V1_6SAM_V1_6_Error7SAM_V1_6_Error_File_Level_Metadata_Tag_Incorrect_Format=SAM_V1_6_Error_File_Level_Metadata_Format_Version_Tag_MissingSAM_V1_6_Error_File_Level_Metadata_Format_Version_Tag_Incorrect_FormatSAM_V1_6_Error_File_Level_Metadata_Format_Version_Value_Incorrect_FormatSAM_V1_6_Error_File_Level_Metadata_Sorting_Order_Tag_Incorrect_Format>SAM_V1_6_Error_File_Level_Metadata_Sorting_Order_Invalid_ValueSAM_V1_6_Error_File_Level_Metadata_Grouping_Of_Alignments_Tag_Incorrect_FormatSAM_V1_6_Error_File_Level_Metadata_Grouping_Of_Alignments_Invalid_ValueSAM_V1_6_Error_File_Level_Metadata_Subsorting_Order_Tag_Incorrect_FormatSAM_V1_6_Error_File_Level_Metadata_Subsorting_Order_Incorrect_FormatSAM_V1_6_Error_Reference_Sequence_Dictionary_Reference_Sequence_Name_Tag_MissingSAM_V1_6_Error_Reference_Sequence_Dictionary_Reference_Sequence_Name_Incorrect_FormatSAM_V1_6_Error_Reference_Sequence_Dictionary_Reference_Sequence_Name_Invalid_ValueSAM_V1_6_Error_Reference_Sequence_Dictionary_Reference_Sequence_Length_MissingSAM_V1_6_Error_Reference_Sequence_Dictionary_Reference_Sequence_Length_Incorrect_FormatSAM_V1_6_Error_Reference_Sequence_Dictionary_Reference_Sequence_Length_Invalid_ValueSAM_V1_6_Error_Reference_Sequence_Dictionary_Alternative_Locus_Incorrect_FormatSAM_V1_6_Error_Reference_Sequence_Dictionary_Alternative_Reference_Sequence_Names_Incorrect_FormatSAM_V1_6_Error_Reference_Sequence_Dictionary_Alternative_Reference_Sequence_Names_Invalid_ValueSAM_V1_6_Error_Reference_Sequence_Dictionary_Genome_Assembly_Identifier_Incorrect_FormatSAM_V1_6_Error_Reference_Sequence_Dictionary_Description_Incorrect_FormatSAM_V1_6_Error_Reference_Sequence_Dictionary_MD5_Checksum_Incorrect_FormatSAM_V1_6_Error_Reference_Sequence_Dictionary_Species_Incorrect_FormatSAM_V1_6_Error_Reference_Sequence_Dictionary_Molecule_Topology_Incorrect_FormatSAM_V1_6_Error_Reference_Sequence_Dictionary_Molecule_Topology_Invalid_ValueSAM_V1_6_Error_Reference_Sequence_Dictionary_URI_Incorrect_FormatSAM_V1_6_Error_Read_Group_Read_Group_Identifier_Incorrect_Format;SAM_V1_6_Error_Read_Group_Read_Group_Identifier_Tag_Missing;SAM_V1_6_Error_Read_Group_Barcode_Sequence_Incorrect_Format