mcmc-0.4.0.0: Sample from a posterior using Markov chain Monte Carlo

Index

>$<Mcmc.Monitor.Parameter, Mcmc.Monitor.ParameterBatch, Mcmc
@~Mcmc.Proposal, Mcmc
aAutoTuneMcmc.Algorithm
AcceptanceMcmc.Proposal
acceptanceMcmc.Chain.Chain
acceptanceRateMcmc.Proposal
acceptanceRatesMcmc.Proposal
aCloseMonitorsMcmc.Algorithm
aExecuteMonitorsMcmc.Algorithm
aIterateMcmc.Algorithm
aIterationMcmc.Algorithm
AlgorithmMcmc.Algorithm
AnalysisName 
1 (Type/Class)Mcmc.Settings, Mcmc
2 (Data Constructor)Mcmc.Settings, Mcmc
aNameMcmc.Algorithm
aOpenMonitorsMcmc.Algorithm
aResetAcceptanceMcmc.Algorithm
aSaveMcmc.Algorithm
aStdMonitorHeaderMcmc.Algorithm
aSummarizeCycleMcmc.Algorithm
autoTuneCycleMcmc.Proposal
betaMcmc.Proposal.Simplex, Mcmc
burnInIterationsMcmc.Settings, Mcmc
BurnInSpecificationMcmc.Settings, Mcmc
BurnInWithAutoTuningMcmc.Settings, Mcmc
BurnInWithoutAutoTuningMcmc.Settings, Mcmc
ccProposalsMcmc.Proposal
Chain 
1 (Type/Class)Mcmc.Chain.Chain
2 (Data Constructor)Mcmc.Chain.Chain
chainIdMcmc.Chain.Chain
ContinueMcmc.Settings, Mcmc
createProposalMcmc.Proposal
CycleMcmc.Proposal, Mcmc
cycleMcmc.Chain.Chain
cycleFromListMcmc.Proposal, Mcmc
DebugMcmc.Settings, Mcmc
dirichletMcmc.Proposal.Simplex, Mcmc
emptyAMcmc.Proposal
Environment 
1 (Type/Class)Mcmc.Environment
2 (Data Constructor)Mcmc.Environment
ExecutionModeMcmc.Settings, Mcmc
exponentialMcmc.Prior, Mcmc
FailMcmc.Settings, Mcmc
freezeTMcmc.Chain.Trace
fromAcceptanceMcmc.Proposal
fromAnalysisNameMcmc.Settings, Mcmc
fromIterationsMcmc.Settings, Mcmc
fromMHGMcmc.Algorithm.Metropolis, Mcmc
fromNChainsMcmc.Algorithm.MC3, Mcmc
fromNSwapsMcmc.Algorithm.MC3, Mcmc
fromPDescriptionMcmc.Proposal
fromPNameMcmc.Proposal, Mcmc
fromPWeightMcmc.Proposal, Mcmc
fromSavedChainMcmc.Chain.Save
fromSwapPeriodMcmc.Algorithm.MC3, Mcmc
gammaMcmc.Prior, Mcmc
generatorMcmc.Chain.Chain
genericContinuousMcmc.Proposal.Generic
genericDiscreteMcmc.Proposal.Generic
getMonitorBatchSizeMcmc.Monitor
getOptimalRateMcmc.Proposal
headTMcmc.Chain.Trace
InfoMcmc.Settings, Mcmc
initializeEnvironmentMcmc.Environment
iterationMcmc.Chain.Chain
Iterations 
1 (Type/Class)Mcmc.Settings, Mcmc
2 (Data Constructor)Mcmc.Settings, Mcmc
largerThanMcmc.Prior, Mcmc
lengthTMcmc.Chain.Trace
likelihoodMcmc.Chain.Link
LikelihoodFunctionMcmc.Chain.Chain, Mcmc
likelihoodFunctionMcmc.Chain.Chain
Link 
1 (Type/Class)Mcmc.Chain.Link
2 (Data Constructor)Mcmc.Chain.Link
linkMcmc.Chain.Chain
logHandleMcmc.Environment
lowerThanMcmc.Prior, Mcmc
mBatchesMcmc.Monitor
mbpFuncMcmc.Monitor.ParameterBatch, Mcmc
mbpNameMcmc.Monitor.ParameterBatch, Mcmc
MC3 
1 (Type/Class)Mcmc.Algorithm.MC3, Mcmc
2 (Data Constructor)Mcmc.Algorithm.MC3, Mcmc
mc3Mcmc.Algorithm.MC3, Mcmc
mc3GeneratorMcmc.Algorithm.MC3, Mcmc
mc3IterationMcmc.Algorithm.MC3, Mcmc
mc3LoadMcmc.Algorithm.MC3, Mcmc
mc3MHGChainsMcmc.Algorithm.MC3, Mcmc
mc3NChainsMcmc.Algorithm.MC3, Mcmc
mc3NSwapsMcmc.Algorithm.MC3, Mcmc
mc3ReciprocalTemperaturesMcmc.Algorithm.MC3, Mcmc
mc3SaveMcmc.Algorithm.MC3, Mcmc
MC3Settings 
1 (Type/Class)Mcmc.Algorithm.MC3, Mcmc
2 (Data Constructor)Mcmc.Algorithm.MC3, Mcmc
mc3SettingsMcmc.Algorithm.MC3, Mcmc
mc3SwapAcceptanceMcmc.Algorithm.MC3, Mcmc
mc3SwapPeriodMcmc.Algorithm.MC3, Mcmc
mCloseMcmc.Monitor
mcmcMcmc.Mcmc, Mcmc
mcmcContinueMcmc.Mcmc, Mcmc
mExecMcmc.Monitor
mFilesMcmc.Monitor
MHG 
1 (Type/Class)Mcmc.Algorithm.Metropolis, Mcmc
2 (Data Constructor)Mcmc.Algorithm.Metropolis, Mcmc
mhgMcmc.Algorithm.Metropolis, Mcmc
mhgAcceptMcmc.Algorithm.Metropolis, Mcmc
MHGChainsMcmc.Algorithm.MC3, Mcmc
mhgLoadMcmc.Algorithm.Metropolis, Mcmc
mhgSaveMcmc.Algorithm.Metropolis, Mcmc
Monitor 
1 (Type/Class)Mcmc.Monitor, Mcmc
2 (Data Constructor)Mcmc.Monitor, Mcmc
monitorMcmc.Chain.Chain
MonitorBatchMcmc.Monitor, Mcmc
monitorBatchMcmc.Monitor, Mcmc
monitorBatchMeanMcmc.Monitor.ParameterBatch, Mcmc
monitorBatchMeanEMcmc.Monitor.ParameterBatch, Mcmc
monitorBatchMeanFMcmc.Monitor.ParameterBatch, Mcmc
monitorDoubleMcmc.Monitor.Parameter, Mcmc
monitorDoubleEMcmc.Monitor.Parameter, Mcmc
monitorDoubleFMcmc.Monitor.Parameter, Mcmc
MonitorFileMcmc.Monitor, Mcmc
monitorFileMcmc.Monitor, Mcmc
monitorIntMcmc.Monitor.Parameter, Mcmc
MonitorParameter 
1 (Type/Class)Mcmc.Monitor.Parameter, Mcmc
2 (Data Constructor)Mcmc.Monitor.Parameter, Mcmc
MonitorParameterBatch 
1 (Type/Class)Mcmc.Monitor.ParameterBatch, Mcmc
2 (Data Constructor)Mcmc.Monitor.ParameterBatch, Mcmc
MonitorStdOutMcmc.Monitor, Mcmc
monitorStdOutMcmc.Monitor, Mcmc
mOpenMcmc.Monitor
mpFuncMcmc.Monitor.Parameter, Mcmc
mpNameMcmc.Monitor.Parameter, Mcmc
msHeaderMcmc.Monitor
mStdOutMcmc.Monitor
NChains 
1 (Type/Class)Mcmc.Algorithm.MC3, Mcmc
2 (Data Constructor)Mcmc.Algorithm.MC3, Mcmc
negativeMcmc.Prior, Mcmc
NoBurnInMcmc.Settings, Mcmc
noLikelihoodMcmc.Chain.Chain, Mcmc
noPriorMcmc.Chain.Chain, Mcmc
normalMcmc.Prior, Mcmc
NoSaveMcmc.Settings, Mcmc
NoTuneMcmc.Proposal, Mcmc
NSwaps 
1 (Type/Class)Mcmc.Algorithm.MC3, Mcmc
2 (Data Constructor)Mcmc.Algorithm.MC3, Mcmc
openWithExecutionModeMcmc.Settings, Mcmc
OrderMcmc.Proposal, Mcmc
orderProposalsMcmc.Proposal
OverwriteMcmc.Settings, Mcmc
ParallelMcmc.Settings, Mcmc
ParallelizationModeMcmc.Settings, Mcmc
PDescription 
1 (Type/Class)Mcmc.Proposal
2 (Data Constructor)Mcmc.Proposal
pDescriptionMcmc.Proposal
PDimension 
1 (Type/Class)Mcmc.Proposal
2 (Data Constructor)Mcmc.Proposal
pDimensionMcmc.Proposal
PDimensionUnknownMcmc.Proposal
PName 
1 (Type/Class)Mcmc.Proposal, Mcmc
2 (Data Constructor)Mcmc.Proposal, Mcmc
pNameMcmc.Proposal
poissonMcmc.Prior, Mcmc
positiveMcmc.Prior, Mcmc
priorMcmc.Chain.Link
PriorFunctionMcmc.Chain.Chain, Mcmc
priorFunctionMcmc.Chain.Chain
product'Mcmc.Prior, Mcmc
Proposal 
1 (Type/Class)Mcmc.Proposal, Mcmc
2 (Data Constructor)Mcmc.Proposal
proposalHeaderMcmc.Proposal
proposalHLineMcmc.Proposal
ProposalSimpleMcmc.Proposal
pSimpleMcmc.Proposal
pTunerMcmc.Proposal
pushAMcmc.Proposal
pushTMcmc.Chain.Trace
PWeight 
1 (Type/Class)Mcmc.Proposal, Mcmc
2 (Data Constructor)Mcmc.Proposal, Mcmc
pWeightMcmc.Proposal
QuietMcmc.Settings, Mcmc
RandomOMcmc.Proposal, Mcmc
RandomReversibleOMcmc.Proposal, Mcmc
ReciprocalTemperaturesMcmc.Algorithm.MC3, Mcmc
renderDurationMcmc.Monitor.Time
renderDurationSMcmc.Monitor.Time
renderLogMcmc.Monitor.Log
renderTimeMcmc.Monitor.Time
replicateTMcmc.Chain.Trace
resetAMcmc.Proposal
sAnalysisNameMcmc.Settings, Mcmc
SaveMcmc.Settings, Mcmc
savedAcceptanceMcmc.Chain.Save
SavedChain 
1 (Type/Class)Mcmc.Chain.Save
2 (Data Constructor)Mcmc.Chain.Save
savedIdMcmc.Chain.Save
savedIterationMcmc.Chain.Save
savedLinkMcmc.Chain.Save
savedSeedMcmc.Chain.Save
savedTraceMcmc.Chain.Save
savedTuningParametersMcmc.Chain.Save
SaveModeMcmc.Settings, Mcmc
sBurnInMcmc.Settings, Mcmc
scaleMcmc.Proposal.Scale, Mcmc
scaleBactrianMcmc.Proposal.Bactrian, Mcmc
scaleContrarilyMcmc.Proposal.Scale, Mcmc
scaleUnbiasedMcmc.Proposal.Scale, Mcmc
SequentialMcmc.Settings, Mcmc
SequentialOMcmc.Proposal, Mcmc
SequentialReversibleOMcmc.Proposal, Mcmc
setOrderMcmc.Proposal, Mcmc
Settings 
1 (Type/Class)Mcmc.Settings, Mcmc
2 (Data Constructor)Mcmc.Settings, Mcmc
settingsMcmc.Environment
settingsCheckMcmc.Settings, Mcmc
settingsLoadMcmc.Settings, Mcmc
settingsSaveMcmc.Settings, Mcmc
sExecutionModeMcmc.Settings, Mcmc
SimplexMcmc.Proposal.Simplex, Mcmc
simplexFromVectorMcmc.Proposal.Simplex, Mcmc
simplexUniformMcmc.Proposal.Simplex, Mcmc
sIterationsMcmc.Settings, Mcmc
slideMcmc.Proposal.Slide, Mcmc
slideBactrianMcmc.Proposal.Bactrian, Mcmc
slideContrarilyMcmc.Proposal.Slide, Mcmc
slideSymmetricMcmc.Proposal.Slide, Mcmc
slideUniformSymmetricMcmc.Proposal.Slide, Mcmc
sParallelizationModeMcmc.Settings, Mcmc
sSaveModeMcmc.Settings, Mcmc
startMcmc.Chain.Chain
startingTimeMcmc.Environment
stateMcmc.Chain.Link
summarizeCycleMcmc.Proposal
summarizeProposalMcmc.Proposal
sVerbosityMcmc.Settings, Mcmc
SwapPeriod 
1 (Type/Class)Mcmc.Algorithm.MC3, Mcmc
2 (Data Constructor)Mcmc.Algorithm.MC3, Mcmc
takeTMcmc.Chain.Trace
tFuncMcmc.Proposal
thawTMcmc.Chain.Trace
toSavedChainMcmc.Chain.Save
toVectorMcmc.Proposal.Simplex, Mcmc
tParamMcmc.Proposal
TraceMcmc.Chain.Trace
traceMcmc.Chain.Chain
transformKeysAMcmc.Proposal
Tune 
1 (Type/Class)Mcmc.Proposal, Mcmc
2 (Data Constructor)Mcmc.Proposal, Mcmc
tuneMcmc.Proposal
tuneCycleMcmc.Proposal
TunerMcmc.Proposal
uniformMcmc.Prior, Mcmc
VerbosityMcmc.Settings, Mcmc
WarnMcmc.Settings, Mcmc