Utility

Documentation

addLengthHeader :: FastaSequence -> FastaSequence

Adds the length of a sequence to the header of that sequence

addMutationsHeader :: Bool -> Field -> FastaSequence -> FastaSequence

Adds the mutations of a sequence to the header of that sequence

addFillerGermlines :: [FastaSequence] -> CloneMap

Adds filler germlines to normal fasta files

replaceChars :: Char -> Text -> Text -> Text

Replace characters in the first string with another in the second string if they are equal to a certain character and they aren't replaced with a gap.

fromEither :: Either Text b -> b

Error for left