{-# LANGUAGE MultiWayIf #-} {-# LANGUAGE OverloadedStrings #-} {-| Module : $header$ Description : Pandoc filter to create figures from code blocks using your plotting toolkit of choice Copyright : (c) Laurent P René de Cotret, 2020 License : GNU GPL, version 2 or above Maintainer : laurent.decotret@outlook.com Stability : unstable Portability : portable This module defines a Pandoc filter @makePlot@ and related functions that can be used to walk over a Pandoc document and generate figures from code blocks using a multitude of plotting toolkits. The syntax for code blocks is simple, Code blocks with the appropriate class attribute will trigger the filter: * @matplotlib@ for matplotlib-based Python plots; * @plotly_python@ for Plotly-based Python plots; * @matlabplot@ for MATLAB plots; * @mathplot@ for Mathematica plots; * @octaveplot@ for GNU Octave plots; * @ggplot2@ for ggplot2-based R plots; * @gnuplot@ for gnuplot plots; The code block will be reworked into a script and the output figure will be captured. Optionally, the source code used to generate the figure will be linked in the caption. Here are the possible attributes what pandoc-plot understands for ALL toolkits: * @directory=...@ : Directory where to save the figure. * @source=true|false@ : Whether or not to link the source code of this figure in the caption. Ideal for web pages, for example. Default is false. * @format=...@: Format of the generated figure. This can be an extension or an acronym, e.g. @format=PNG@. * @caption="..."@: Specify a plot caption (or alternate text). Captions should be formatted in the same format as the document (e.g. Markdown captions in Markdown documents). * @dpi=...@: Specify a value for figure resolution, or dots-per-inch. Certain toolkits ignore this. * @preamble=...@: Path to a file to include before the code block. Ideal to avoid repetition over many figures. Default values for the above attributes are stored in the @Configuration@ datatype. These can be specified in a YAML file. Here is an example code block which will render a figure using gnuplot, in Markdown: @ ```{.gnuplot format=png caption="Sinusoidal function"} sin(x) set xlabel "x" set ylabel "y" ``` @ -} module Text.Pandoc.Filter.Plot ( -- * Operating on single Pandoc blocks makePlot -- * Operating on whole Pandoc documents , plotTransform -- * Runtime configuration , configuration , Configuration(..) , SaveFormat(..) , Script -- * For testing purposes ONLY , make , availableToolkits , unavailableToolkits ) where import Control.Monad.IO.Class (liftIO) import Control.Monad.Reader (runReaderT) import Data.Maybe (fromMaybe) import System.IO (hPutStrLn, stderr) import Text.Pandoc.Definition import Text.Pandoc.Walk (walkM) import Text.Pandoc.Filter.Plot.Internal -- | Highest-level function that can be walked over a Pandoc tree. -- All code blocks that have the @.plot@ / @.plotly@ class will be considered -- figures. -- -- The target document format determines how the figure captions should be parsed. -- By default (i.e. if Nothing), captions will be parsed as Markdown with LaTeX math @$...$@, makePlot :: Configuration -- ^ Configuration for default values -> Maybe Format -- ^ Input document format -> Block -> IO Block makePlot conf mfmt block = let fmt = fromMaybe (Format "markdown+tex_math_dollars") mfmt in maybe (return block) (\tk -> make tk conf fmt block) (plotToolkit block) -- | Walk over an entire Pandoc document, changing appropriate code blocks -- into figures. Default configuration is used. plotTransform :: Configuration -- ^ Configuration for default values -> Maybe Format -- ^ Input document format -> Pandoc -> IO Pandoc plotTransform conf mfmt = walkM $ makePlot conf mfmt -- | Force to use a particular toolkit to render appropriate code blocks. -- -- Failing to render a figure does not stop the filter, so that you may run the filter -- on documents without having all necessary toolkits installed. In this case, error -- messages are printed to stderr, and blocks are left unchanged. make :: Toolkit -> Configuration -- ^ Configuration for default values -> Format -- ^ Input document format -> Block -> IO Block make tk conf fmt block = runReaderT (makePlot' block) (PlotEnv tk conf) where makePlot' :: Block -> PlotM Block makePlot' blk = parseFigureSpec blk >>= maybe (return blk) (\s -> runScriptIfNecessary s >>= handleResult s) where handleResult spec ScriptSuccess = return $ toImage fmt spec handleResult _ (ScriptChecksFailed msg) = do liftIO $ hPutStrLn stderr $ "pandoc-plot: The script check failed with message: " <> msg return blk handleResult _ (ScriptFailure _ code) = do liftIO $ hPutStrLn stderr $ "pandoc-plot: The script failed with exit code " <> show code return blk -- | Possible errors returned by the filter data PandocPlotError = ScriptError String Int -- ^ Running script has yielded an error | ScriptChecksFailedError String -- ^ Script did not pass all checks deriving (Eq) instance Show PandocPlotError where show (ScriptError cmd exitcode) = mconcat [ "Script error: plot could not be generated.\n" , " Command: ", cmd, "\n" , " Exit code " <> (show exitcode) ] show (ScriptChecksFailedError msg) = "Script did not pass all checks: " <> msg