module Biobase.GFF3.Types where
import Prelude hiding (takeWhile)
import Data.Attoparsec.ByteString.Char8 hiding (isSpace)
import qualified Data.Attoparsec.ByteString.Lazy as L
import qualified Data.ByteString.Char8 as C
import qualified Data.ByteString.Builder as S
import qualified Data.ByteString.Lazy.Char8 as B
import qualified Data.Vector as V
import System.Directory
import Data.Char
import Control.Monad
import Debug.Trace
import Text.Printf
data GFF3 = GFF3
{ gff3Entries :: !(V.Vector GFF3Entry),
gff3Sequence :: !B.ByteString
}
deriving (Eq)
data GFF3Entry = GFF3Entry
{ gff3Seqid :: !B.ByteString,
gff3Source :: !B.ByteString,
gff3Type :: !B.ByteString,
gff3Start :: Int,
gff3End :: Int,
gff3Score :: !B.ByteString,
gff3Strand :: Char,
gff3Phase :: B.ByteString,
gff3Attributes :: !(V.Vector B.ByteString)
}
deriving (Eq)