The BiobaseFR3D package

[ Tags: bioinformatics, gpl, library ] [ Propose Tags ]

Provides importers for FR3D resource files. Of particular interest are basepairs files which describe canonical and non-canonical (non-Watson-Crick) base pairings in RNA secondary structure.

The original FR3D paper is:

FR3D: Finding Local and Composite Recurrent Structural Motifs in RNA 3D Structures, Michael Sarver; Craig L. Zirbel; Jesse Stombaugh; Ali Mokdad; Neocles B. Leontis. /Journal of Mathematical Biology/ (2008) 56:215–252.


Dependencies base (>3 && <5), bytestring, filemanip, iteratee [details]
License GPL-3
Copyright Christian Hoener zu Siederdissen, 2011
Author Christian Hoener zu Siederdissen
Category Bioinformatics
Home page
Uploaded Mon Aug 22 15:25:44 UTC 2011 by ChristianHoener
Distributions NixOS:
Downloads 2502 total (26 in the last 30 days)
Rating (no votes yet) [estimated by rule of succession]
Your Rating
  • λ
  • λ
  • λ
Status Docs uploaded by user
Build status unknown [no reports yet]
Hackage Matrix CI




Maintainer's Corner

For package maintainers and hackage trustees