Contents
Index
BiobaseInfernal-0.0.2.0: Infernal CM manipulation
Index
B
Biobase.Infernal.CM
BEGL
Biobase.Infernal.CM
BEGR
Biobase.Infernal.CM
BIF
Biobase.Infernal.CM
Branch
Biobase.Infernal.CM
CM
1 (Type/Class)
Biobase.Infernal.CM
2 (Data Constructor)
Biobase.Infernal.CM
cmMakeLocal
Biobase.Infernal.CM
cmMakeLocalBegin
Biobase.Infernal.CM
cmMakeLocalEnd
Biobase.Infernal.CM
cmNormalizeProbabilities
Biobase.Infernal.CM
CMProb
Biobase.Infernal.CM
cmProb2Score
Biobase.Infernal.CM
CMScore
Biobase.Infernal.CM
cmScore2Prob
Biobase.Infernal.CM
CMType
Biobase.Infernal.CM
cmType
Biobase.Infernal.CM
colAnnotations
Biobase.Infernal.Stockholm
D
Biobase.Infernal.CM
E
Biobase.Infernal.CM
Emission
Biobase.Infernal.CM
EmitP
Biobase.Infernal.CM
EmitS
Biobase.Infernal.CM
END
Biobase.Infernal.CM
eNuc
Biobase.Infernal.CM
eNucL
Biobase.Infernal.CM
eNucR
Biobase.Infernal.CM
escore
Biobase.Infernal.CM
exAnnotations
Biobase.Infernal.Stockholm
fromFile
1 (Function)
Biobase.Infernal.Stockholm.Import
2 (Function)
Biobase.Infernal.CM.Import
fromString
Biobase.Infernal.CM.Import
header
Biobase.Infernal.CM
IL
Biobase.Infernal.CM
IR
Biobase.Infernal.CM
localBegin
Biobase.Infernal.CM
localBeginPossible
Biobase.Infernal.CM
localBeginProb2Score
Biobase.Infernal.CM
localBeginScore2Prob
Biobase.Infernal.CM
localEnd
Biobase.Infernal.CM
localEndPossible
Biobase.Infernal.CM
localEndProb2Score
Biobase.Infernal.CM
localEndScore2Prob
Biobase.Infernal.CM
MATL
Biobase.Infernal.CM
MATP
Biobase.Infernal.CM
MATR
Biobase.Infernal.CM
mkPair
Biobase.Infernal.Stockholm.Import
ML
Biobase.Infernal.CM
MP
Biobase.Infernal.CM
MR
Biobase.Infernal.CM
nchildren
Biobase.Infernal.CM
nid
Biobase.Infernal.CM
Node
1 (Type/Class)
Biobase.Infernal.CM
2 (Data Constructor)
Biobase.Infernal.CM
nodeMainState
Biobase.Infernal.CM
nodeMainStateAssocs
Biobase.Infernal.CM
nodes
Biobase.Infernal.CM
nodeToString
Biobase.Infernal.CM.Export
NodeType
Biobase.Infernal.CM
nparents
Biobase.Infernal.CM
nstates
Biobase.Infernal.CM
ntag
Biobase.Infernal.CM
ntype
Biobase.Infernal.CM
nullModel
Biobase.Infernal.CM
prob2Score
Biobase.Infernal.CM
ROOT
Biobase.Infernal.CM
S
Biobase.Infernal.CM
schildren
Biobase.Infernal.CM
score2Prob
Biobase.Infernal.CM
semission
Biobase.Infernal.CM
sequences
Biobase.Infernal.Stockholm
sid
Biobase.Infernal.CM
snode
Biobase.Infernal.CM
sparents
Biobase.Infernal.CM
stag
Biobase.Infernal.CM
State
1 (Type/Class)
Biobase.Infernal.CM
2 (Data Constructor)
Biobase.Infernal.CM
stateProb2Score
Biobase.Infernal.CM
states
Biobase.Infernal.CM
stateScore2Prob
Biobase.Infernal.CM
statesProb2Score
Biobase.Infernal.CM
statesScore2Prob
Biobase.Infernal.CM
stateToString
Biobase.Infernal.CM.Export
StateType
Biobase.Infernal.CM
Stockholm
1 (Type/Class)
Biobase.Infernal.Stockholm
2 (Data Constructor)
Biobase.Infernal.Stockholm
stringS
Biobase.Infernal.CM.Export
stype
Biobase.Infernal.CM
tchild
Biobase.Infernal.CM
toString
Biobase.Infernal.CM.Export
Transition
1 (Type/Class)
Biobase.Infernal.CM
2 (Data Constructor)
Biobase.Infernal.CM
transitionTargets
Biobase.Infernal.CM
tscore
Biobase.Infernal.CM
unknown
Biobase.Infernal.Stockholm