| +. | Biobase.Types.Index |
| -. | Biobase.Types.Index |
| Accession | |
| 1 (Type/Class) | Biobase.Types.Accession |
| 2 (Data Constructor) | Biobase.Types.Accession |
| accession | |
| 1 (Function) | Biobase.Types.Accession |
| 2 (Function) | Biobase.Types.Taxonomy |
| accession' | Biobase.Types.Accession |
| AntiSense | Biobase.Types.Strand |
| Bitscore | |
| 1 (Type/Class) | Biobase.Types.Bitscore |
| 2 (Data Constructor) | Biobase.Types.Bitscore |
| checkIndex | Biobase.Types.Index |
| Clan | |
| 1 (Type/Class) | Biobase.Types.Accession |
| 2 (Data Constructor) | Biobase.Types.Accession |
| Class | Biobase.Types.Taxonomy |
| Classification | Biobase.Types.Taxonomy |
| classification | Biobase.Types.Taxonomy |
| Complement | Biobase.Types.Sequence |
| complement | Biobase.Types.Sequence |
| DekaG | Biobase.Types.Energy |
| delta | Biobase.Types.Index |
| DeltaDekaGibbs | Biobase.Types.Energy |
| DG | |
| 1 (Type/Class) | Biobase.Types.Energy |
| 2 (Data Constructor) | Biobase.Types.Energy |
| dG | Biobase.Types.Energy |
| DLO | |
| 1 (Type/Class) | Biobase.Types.Odds |
| 2 (Data Constructor) | Biobase.Types.Odds |
| dna2rna | Biobase.Types.Sequence |
| dnaComplement | Biobase.Types.Sequence |
| DNAseq | |
| 1 (Type/Class) | Biobase.Types.Sequence |
| 2 (Data Constructor) | Biobase.Types.Sequence |
| dnaseq | Biobase.Types.Sequence |
| epsilon | Biobase.Types.NumericalExtremes |
| Evalue | |
| 1 (Type/Class) | Biobase.Types.Evalue |
| 2 (Data Constructor) | Biobase.Types.Evalue |
| Family | Biobase.Types.Taxonomy |
| fromInt0 | Biobase.Types.Index |
| Genus | Biobase.Types.Taxonomy |
| getBitscore | Biobase.Types.Bitscore |
| getDekaG | Biobase.Types.Energy |
| getDLO | Biobase.Types.Odds |
| getEvalue | Biobase.Types.Evalue |
| getIndex | Biobase.Types.Index.Type, Biobase.Types.Index |
| getSpeciesNameRep | Biobase.Types.Names |
| getStrand | Biobase.Types.Strand |
| getTaxonomicRank | Biobase.Types.Names |
| guessAccessionType | Biobase.Types.Accession |
| I0 | Biobase.Types.Index |
| I1 | Biobase.Types.Index |
| Index | |
| 1 (Type/Class) | Biobase.Types.Index.Type, Biobase.Types.Index |
| 2 (Data Constructor) | Biobase.Types.Index.Type |
| index | Biobase.Types.Index.Type, Biobase.Types.Index |
| Kingdom | Biobase.Types.Taxonomy |
| M | Biobase.Types.Strand |
| maxExtreme | Biobase.Types.NumericalExtremes |
| maxFinite | Biobase.Types.NumericalExtremes |
| maxLarge | Biobase.Types.NumericalExtremes |
| maybeIndex | Biobase.Types.Index.Type, Biobase.Types.Index |
| minExtreme | Biobase.Types.NumericalExtremes |
| minFinite | Biobase.Types.NumericalExtremes |
| minLarge | Biobase.Types.NumericalExtremes |
| mkDNAseq | Biobase.Types.Sequence |
| mkRNAds | Biobase.Types.Structure |
| mkRNAseq | Biobase.Types.Sequence |
| MVector | Biobase.Types.Strand, Biobase.Types.Odds, Biobase.Types.Names, Biobase.Types.Index.Type, Biobase.Types.Evalue, Biobase.Types.Energy, Biobase.Types.Bitscore, Biobase.Types.Taxonomy |
| MV_Bitscore | Biobase.Types.Bitscore |
| MV_Classification | Biobase.Types.Taxonomy |
| MV_DeltaDekaGibbs | Biobase.Types.Energy |
| MV_DG | Biobase.Types.Energy |
| MV_DLO | Biobase.Types.Odds |
| MV_Evalue | Biobase.Types.Evalue |
| MV_Index | Biobase.Types.Index.Type |
| MV_SpeciesName | Biobase.Types.Names |
| MV_Strand | Biobase.Types.Strand |
| Nucleotide | |
| 1 (Type/Class) | Biobase.Types.Accession |
| 2 (Data Constructor) | Biobase.Types.Accession |
| NumericalEpsilon | Biobase.Types.NumericalExtremes |
| NumericalExtremes | Biobase.Types.NumericalExtremes |
| Order | Biobase.Types.Taxonomy |
| P | Biobase.Types.Strand |
| pairDist | Biobase.Types.Structure |
| Pfam | |
| 1 (Type/Class) | Biobase.Types.Accession |
| 2 (Data Constructor) | Biobase.Types.Accession |
| Phylum | Biobase.Types.Taxonomy |
| prob2Score | Biobase.Types.Bitscore |
| Protein | |
| 1 (Type/Class) | Biobase.Types.Accession |
| 2 (Data Constructor) | Biobase.Types.Accession |
| reIndex | Biobase.Types.Index |
| retagAccession | Biobase.Types.Accession |
| Rfam | |
| 1 (Type/Class) | Biobase.Types.Accession |
| 2 (Data Constructor) | Biobase.Types.Accession |
| rna2dna | Biobase.Types.Sequence |
| rnaComplement | Biobase.Types.Sequence |
| RNAds | |
| 1 (Type/Class) | Biobase.Types.Structure |
| 2 (Data Constructor) | Biobase.Types.Structure |
| rnads | Biobase.Types.Structure |
| rnads2rnassPair | Biobase.Types.Structure |
| rnadsL | Biobase.Types.Structure |
| rnadsR | Biobase.Types.Structure |
| RNAensembleStructure | Biobase.Types.Structure |
| RNAes | Biobase.Types.Structure |
| rnaes | Biobase.Types.Structure |
| RNApset | |
| 1 (Type/Class) | Biobase.Types.Structure |
| 2 (Data Constructor) | Biobase.Types.Structure |
| rnapset | Biobase.Types.Structure |
| RNAseq | |
| 1 (Type/Class) | Biobase.Types.Sequence |
| 2 (Data Constructor) | Biobase.Types.Sequence |
| rnaseq | Biobase.Types.Sequence |
| RNAss | |
| 1 (Type/Class) | Biobase.Types.Structure |
| 2 (Data Constructor) | Biobase.Types.Structure |
| rnass | Biobase.Types.Structure |
| rnassPairSet | Biobase.Types.Structure |
| rnassPairSet' | Biobase.Types.Structure |
| RNAStructureError | |
| 1 (Type/Class) | Biobase.Types.Structure |
| 2 (Data Constructor) | Biobase.Types.Structure |
| score2Prob | Biobase.Types.Bitscore |
| Sense | Biobase.Types.Strand |
| SequenceID | |
| 1 (Type/Class) | Biobase.Types.Sequence |
| 2 (Data Constructor) | Biobase.Types.Sequence |
| sequenceID | Biobase.Types.Sequence |
| sequenceIDstring | Biobase.Types.Sequence |
| Species | |
| 1 (Type/Class) | Biobase.Types.Accession |
| 2 (Data Constructor) | Biobase.Types.Accession |
| 3 (Data Constructor) | Biobase.Types.Taxonomy |
| species | Biobase.Types.Taxonomy |
| SpeciesName | |
| 1 (Type/Class) | Biobase.Types.Names |
| 2 (Data Constructor) | Biobase.Types.Names |
| speciesName | Biobase.Types.Names |
| speciesNameBimap | Biobase.Types.Names.Internal |
| speciesNameBimapAdd | Biobase.Types.Names.Internal |
| speciesNameBimapLookupInt | Biobase.Types.Names.Internal |
| Strand | |
| 1 (Type/Class) | Biobase.Types.Strand |
| 2 (Data Constructor) | Biobase.Types.Strand |
| SubOrder | Biobase.Types.Taxonomy |
| Taxon | |
| 1 (Type/Class) | Biobase.Types.Taxonomy |
| 2 (Data Constructor) | Biobase.Types.Taxonomy |
| TaxonomicRank | |
| 1 (Type/Class) | Biobase.Types.Names |
| 2 (Data Constructor) | Biobase.Types.Names |
| toInt0 | Biobase.Types.Index |
| Transcribe | Biobase.Types.Sequence |
| transcribe | Biobase.Types.Sequence |
| TranscribeTo | Biobase.Types.Sequence |
| Unknown | Biobase.Types.Taxonomy |
| unsafeMinus | Biobase.Types.Index |
| unsafePlus | Biobase.Types.Index |
| Vector | Biobase.Types.Strand, Biobase.Types.Odds, Biobase.Types.Names, Biobase.Types.Index.Type, Biobase.Types.Evalue, Biobase.Types.Energy, Biobase.Types.Bitscore, Biobase.Types.Taxonomy |
| verifyRNAss | Biobase.Types.Structure |
| V_Bitscore | Biobase.Types.Bitscore |
| V_Classification | Biobase.Types.Taxonomy |
| V_DeltaDekaGibbs | Biobase.Types.Energy |
| V_DG | Biobase.Types.Energy |
| V_DLO | Biobase.Types.Odds |
| V_Evalue | Biobase.Types.Evalue |
| V_Index | Biobase.Types.Index.Type |
| V_SpeciesName | Biobase.Types.Names |
| V_Strand | Biobase.Types.Strand |
| _dnaseq | Biobase.Types.Sequence |
| _getAccession | Biobase.Types.Accession |
| _rnadsL | Biobase.Types.Structure |
| _rnadsR | Biobase.Types.Structure |
| _rnaes | Biobase.Types.Structure |
| _rnaOffender | Biobase.Types.Structure |
| _rnapset | Biobase.Types.Structure |
| _rnaseq | Biobase.Types.Sequence |
| _rnass | Biobase.Types.Structure |
| _rnaStructureError | Biobase.Types.Structure |
| _sequenceID | Biobase.Types.Sequence |