algebraic-graphs-0.6: A library for algebraic graph construction and transformation
Copyright(c) Andrey Mokhov 2016-2021
LicenseMIT (see the file LICENSE)
Maintainerandrey.mokhov@gmail.com
Stabilityexperimental
Safe HaskellNone
LanguageHaskell2010

Algebra.Graph

Description

Alga is a library for algebraic construction and manipulation of graphs in Haskell. See this paper for the motivation behind the library, the underlying theory, and implementation details.

This module defines the core data type Graph and associated algorithms. For graphs that are known to be non-empty at compile time, see Algebra.Graph.NonEmpty. Graph is an instance of type classes defined in modules Algebra.Graph.Class and Algebra.Graph.HigherKinded.Class, which can be used for polymorphic graph construction and manipulation.

Synopsis

Algebraic data type for graphs

data Graph a Source #

The Graph data type is a deep embedding of the core graph construction primitives empty, vertex, overlay and connect. We define a Num instance as a convenient notation for working with graphs:

0           == vertex 0
1 + 2       == overlay (vertex 1) (vertex 2)
1 * 2       == connect (vertex 1) (vertex 2)
1 + 2 * 3   == overlay (vertex 1) (connect (vertex 2) (vertex 3))
1 * (2 + 3) == connect (vertex 1) (overlay (vertex 2) (vertex 3))

Note: the Num instance does not satisfy several "customary laws" of Num, which dictate that fromInteger 0 and fromInteger 1 should act as additive and multiplicative identities, and negate as additive inverse. Nevertheless, overloading fromInteger, + and * is very convenient when working with algebraic graphs; we hope that in future Haskell's Prelude will provide a more fine-grained class hierarchy for algebraic structures, which we would be able to utilise without violating any laws.

The Eq instance is currently implemented using the AdjacencyMap as the canonical graph representation and satisfies all axioms of algebraic graphs:

  • overlay is commutative and associative:

          x + y == y + x
    x + (y + z) == (x + y) + z
  • connect is associative and has empty as the identity:

      x * empty == x
      empty * x == x
    x * (y * z) == (x * y) * z
  • connect distributes over overlay:

    x * (y + z) == x * y + x * z
    (x + y) * z == x * z + y * z
  • connect can be decomposed:

    x * y * z == x * y + x * z + y * z

The following useful theorems can be proved from the above set of axioms.

  • overlay has empty as the identity and is idempotent:

      x + empty == x
      empty + x == x
          x + x == x
  • Absorption and saturation of connect:

    x * y + x + y == x * y
        x * x * x == x * x

When specifying the time and memory complexity of graph algorithms, n will denote the number of vertices in the graph, m will denote the number of edges in the graph, and s will denote the size of the corresponding Graph expression. For example, if g is a Graph then n, m and s can be computed as follows:

n == vertexCount g
m == edgeCount g
s == size g

Note that size counts all leaves of the expression:

vertexCount empty           == 0
size        empty           == 1
vertexCount (vertex x)      == 1
size        (vertex x)      == 1
vertexCount (empty + empty) == 0
size        (empty + empty) == 2

Converting a Graph to the corresponding AdjacencyMap takes O(s + m * log(m)) time and O(s + m) memory. This is also the complexity of the graph equality test, because it is currently implemented by converting graph expressions to canonical representations based on adjacency maps.

The total order on graphs is defined using size-lexicographic comparison:

  • Compare the number of vertices. In case of a tie, continue.
  • Compare the sets of vertices. In case of a tie, continue.
  • Compare the number of edges. In case of a tie, continue.
  • Compare the sets of edges.

Here are a few examples:

vertex 1 < vertex 2
vertex 3 < edge 1 2
vertex 1 < edge 1 1
edge 1 1 < edge 1 2
edge 1 2 < edge 1 1 + edge 2 2
edge 1 2 < edge 1 3

Note that the resulting order refines the isSubgraphOf relation and is compatible with overlay and connect operations:

isSubgraphOf x y ==> x <= y
empty <= x
x     <= x + y
x + y <= x * y

Deforestation (fusion) is implemented for some functions in this module. This means that when a function tagged as a "good producer" is composed with a function tagged as a "good consumer", the intermediate structure will not be built.

Constructors

Empty 
Vertex a 
Overlay (Graph a) (Graph a) 
Connect (Graph a) (Graph a) 

Instances

Instances details
Monad Graph Source #

>>= is a good consumer and producer.

Instance details

Defined in Algebra.Graph

Methods

(>>=) :: Graph a -> (a -> Graph b) -> Graph b #

(>>) :: Graph a -> Graph b -> Graph b #

return :: a -> Graph a #

Functor Graph Source #

fmap is a good consumer and producer.

Instance details

Defined in Algebra.Graph

Methods

fmap :: (a -> b) -> Graph a -> Graph b #

(<$) :: a -> Graph b -> Graph a #

Applicative Graph Source #

<*> is a good consumer of its first argument and a good producer.

Instance details

Defined in Algebra.Graph

Methods

pure :: a -> Graph a #

(<*>) :: Graph (a -> b) -> Graph a -> Graph b #

liftA2 :: (a -> b -> c) -> Graph a -> Graph b -> Graph c #

(*>) :: Graph a -> Graph b -> Graph b #

(<*) :: Graph a -> Graph b -> Graph a #

Alternative Graph Source # 
Instance details

Defined in Algebra.Graph

Methods

empty :: Graph a #

(<|>) :: Graph a -> Graph a -> Graph a #

some :: Graph a -> Graph [a] #

many :: Graph a -> Graph [a] #

MonadPlus Graph Source # 
Instance details

Defined in Algebra.Graph

Methods

mzero :: Graph a #

mplus :: Graph a -> Graph a -> Graph a #

Graph Graph Source # 
Instance details

Defined in Algebra.Graph.HigherKinded.Class

Methods

connect :: Graph a -> Graph a -> Graph a Source #

Ord a => Eq (Graph a) Source #

== is a good consumer of both arguments.

Instance details

Defined in Algebra.Graph

Methods

(==) :: Graph a -> Graph a -> Bool #

(/=) :: Graph a -> Graph a -> Bool #

Num a => Num (Graph a) Source #

Note: this does not satisfy the usual ring laws; see Graph for more details.

Instance details

Defined in Algebra.Graph

Methods

(+) :: Graph a -> Graph a -> Graph a #

(-) :: Graph a -> Graph a -> Graph a #

(*) :: Graph a -> Graph a -> Graph a #

negate :: Graph a -> Graph a #

abs :: Graph a -> Graph a #

signum :: Graph a -> Graph a #

fromInteger :: Integer -> Graph a #

Ord a => Ord (Graph a) Source #

compare is a good consumer of both arguments.

Instance details

Defined in Algebra.Graph

Methods

compare :: Graph a -> Graph a -> Ordering #

(<) :: Graph a -> Graph a -> Bool #

(<=) :: Graph a -> Graph a -> Bool #

(>) :: Graph a -> Graph a -> Bool #

(>=) :: Graph a -> Graph a -> Bool #

max :: Graph a -> Graph a -> Graph a #

min :: Graph a -> Graph a -> Graph a #

Show a => Show (Graph a) Source # 
Instance details

Defined in Algebra.Graph

Methods

showsPrec :: Int -> Graph a -> ShowS #

show :: Graph a -> String #

showList :: [Graph a] -> ShowS #

IsString a => IsString (Graph a) Source # 
Instance details

Defined in Algebra.Graph

Methods

fromString :: String -> Graph a #

Generic (Graph a) Source # 
Instance details

Defined in Algebra.Graph

Associated Types

type Rep (Graph a) :: Type -> Type #

Methods

from :: Graph a -> Rep (Graph a) x #

to :: Rep (Graph a) x -> Graph a #

Semigroup (Graph a) Source #

Defined via overlay.

Instance details

Defined in Algebra.Graph

Methods

(<>) :: Graph a -> Graph a -> Graph a #

sconcat :: NonEmpty (Graph a) -> Graph a #

stimes :: Integral b => b -> Graph a -> Graph a #

Monoid (Graph a) Source #

Defined via overlay and empty.

Instance details

Defined in Algebra.Graph

Methods

mempty :: Graph a #

mappend :: Graph a -> Graph a -> Graph a #

mconcat :: [Graph a] -> Graph a #

NFData a => NFData (Graph a) Source # 
Instance details

Defined in Algebra.Graph

Methods

rnf :: Graph a -> () #

Ord a => ToGraph (Graph a) Source # 
Instance details

Defined in Algebra.Graph.ToGraph

Associated Types

type ToVertex (Graph a) Source #

Methods

toGraph :: Graph a -> Graph (ToVertex (Graph a)) Source #

foldg :: r -> (ToVertex (Graph a) -> r) -> (r -> r -> r) -> (r -> r -> r) -> Graph a -> r Source #

isEmpty :: Graph a -> Bool Source #

hasVertex :: ToVertex (Graph a) -> Graph a -> Bool Source #

hasEdge :: ToVertex (Graph a) -> ToVertex (Graph a) -> Graph a -> Bool Source #

vertexCount :: Graph a -> Int Source #

edgeCount :: Graph a -> Int Source #

vertexList :: Graph a -> [ToVertex (Graph a)] Source #

edgeList :: Graph a -> [(ToVertex (Graph a), ToVertex (Graph a))] Source #

vertexSet :: Graph a -> Set (ToVertex (Graph a)) Source #

vertexIntSet :: Graph a -> IntSet Source #

edgeSet :: Graph a -> Set (ToVertex (Graph a), ToVertex (Graph a)) Source #

preSet :: ToVertex (Graph a) -> Graph a -> Set (ToVertex (Graph a)) Source #

preIntSet :: Int -> Graph a -> IntSet Source #

postSet :: ToVertex (Graph a) -> Graph a -> Set (ToVertex (Graph a)) Source #

postIntSet :: Int -> Graph a -> IntSet Source #

adjacencyList :: Graph a -> [(ToVertex (Graph a), [ToVertex (Graph a)])] Source #

dfsForest :: Graph a -> Forest (ToVertex (Graph a)) Source #

dfsForestFrom :: [ToVertex (Graph a)] -> Graph a -> Forest (ToVertex (Graph a)) Source #

dfs :: [ToVertex (Graph a)] -> Graph a -> [ToVertex (Graph a)] Source #

reachable :: ToVertex (Graph a) -> Graph a -> [ToVertex (Graph a)] Source #

topSort :: Graph a -> Either (Cycle (ToVertex (Graph a))) [ToVertex (Graph a)] Source #

isAcyclic :: Graph a -> Bool Source #

toAdjacencyMap :: Graph a -> AdjacencyMap (ToVertex (Graph a)) Source #

toAdjacencyMapTranspose :: Graph a -> AdjacencyMap (ToVertex (Graph a)) Source #

toAdjacencyIntMap :: Graph a -> AdjacencyIntMap Source #

toAdjacencyIntMapTranspose :: Graph a -> AdjacencyIntMap Source #

isDfsForestOf :: Forest (ToVertex (Graph a)) -> Graph a -> Bool Source #

isTopSortOf :: [ToVertex (Graph a)] -> Graph a -> Bool Source #

Graph (Graph a) Source # 
Instance details

Defined in Algebra.Graph.Class

Associated Types

type Vertex (Graph a) Source #

Methods

empty :: Graph a Source #

vertex :: Vertex (Graph a) -> Graph a Source #

overlay :: Graph a -> Graph a -> Graph a Source #

connect :: Graph a -> Graph a -> Graph a Source #

type Rep (Graph a) Source # 
Instance details

Defined in Algebra.Graph

type ToVertex (Graph a) Source # 
Instance details

Defined in Algebra.Graph.ToGraph

type ToVertex (Graph a) = a
type Vertex (Graph a) Source # 
Instance details

Defined in Algebra.Graph.Class

type Vertex (Graph a) = a

Basic graph construction primitives

empty :: Graph a Source #

Construct the empty graph. An alias for the constructor Empty.

isEmpty     empty == True
hasVertex x empty == False
vertexCount empty == 0
edgeCount   empty == 0
size        empty == 1

vertex :: a -> Graph a Source #

Construct the graph comprising a single isolated vertex. An alias for the constructor Vertex.

isEmpty     (vertex x) == False
hasVertex x (vertex y) == (x == y)
vertexCount (vertex x) == 1
edgeCount   (vertex x) == 0
size        (vertex x) == 1

edge :: a -> a -> Graph a Source #

Construct the graph comprising a single edge.

edge x y               == connect (vertex x) (vertex y)
hasEdge x y (edge x y) == True
edgeCount   (edge x y) == 1
vertexCount (edge 1 1) == 1
vertexCount (edge 1 2) == 2

overlay :: Graph a -> Graph a -> Graph a Source #

Overlay two graphs. An alias for the constructor Overlay. This is a commutative, associative and idempotent operation with the identity empty. Complexity: O(1) time and memory, O(s1 + s2) size.

isEmpty     (overlay x y) == isEmpty   x   && isEmpty   y
hasVertex z (overlay x y) == hasVertex z x || hasVertex z y
vertexCount (overlay x y) >= vertexCount x
vertexCount (overlay x y) <= vertexCount x + vertexCount y
edgeCount   (overlay x y) >= edgeCount x
edgeCount   (overlay x y) <= edgeCount x   + edgeCount y
size        (overlay x y) == size x        + size y
vertexCount (overlay 1 2) == 2
edgeCount   (overlay 1 2) == 0

connect :: Graph a -> Graph a -> Graph a Source #

Connect two graphs. An alias for the constructor Connect. This is an associative operation with the identity empty, which distributes over overlay and obeys the decomposition axiom. Complexity: O(1) time and memory, O(s1 + s2) size. Note that the number of edges in the resulting graph is quadratic with respect to the number of vertices of the arguments: m = O(m1 + m2 + n1 * n2).

isEmpty     (connect x y) == isEmpty   x   && isEmpty   y
hasVertex z (connect x y) == hasVertex z x || hasVertex z y
vertexCount (connect x y) >= vertexCount x
vertexCount (connect x y) <= vertexCount x + vertexCount y
edgeCount   (connect x y) >= edgeCount x
edgeCount   (connect x y) >= edgeCount y
edgeCount   (connect x y) >= vertexCount x * vertexCount y
edgeCount   (connect x y) <= vertexCount x * vertexCount y + edgeCount x + edgeCount y
size        (connect x y) == size x        + size y
vertexCount (connect 1 2) == 2
edgeCount   (connect 1 2) == 1

vertices :: [a] -> Graph a Source #

Construct the graph comprising a given list of isolated vertices. Complexity: O(L) time, memory and size, where L is the length of the given list.

Good consumer of lists and producer of graphs.

vertices []            == empty
vertices [x]           == vertex x
vertices               == overlays . map vertex
hasVertex x . vertices == elem x
vertexCount . vertices == length . nub
vertexSet   . vertices == Set.fromList

edges :: [(a, a)] -> Graph a Source #

Construct the graph from a list of edges. Complexity: O(L) time, memory and size, where L is the length of the given list.

Good consumer of lists and producer of graphs.

edges []          == empty
edges [(x,y)]     == edge x y
edges             == overlays . map (uncurry edge)
edgeCount . edges == length . nub

overlays :: [Graph a] -> Graph a Source #

Overlay a given list of graphs. Complexity: O(L) time and memory, and O(S) size, where L is the length of the given list, and S is the sum of sizes of the graphs in the list.

Good consumer of lists and producer of graphs.

overlays []        == empty
overlays [x]       == x
overlays [x,y]     == overlay x y
overlays           == foldr overlay empty
isEmpty . overlays == all isEmpty

connects :: [Graph a] -> Graph a Source #

Connect a given list of graphs. Complexity: O(L) time and memory, and O(S) size, where L is the length of the given list, and S is the sum of sizes of the graphs in the list.

Good consumer of lists and producer of graphs.

connects []        == empty
connects [x]       == x
connects [x,y]     == connect x y
connects           == foldr connect empty
isEmpty . connects == all isEmpty

Graph folding

foldg :: b -> (a -> b) -> (b -> b -> b) -> (b -> b -> b) -> Graph a -> b Source #

Generalised Graph folding: recursively collapse a Graph by applying the provided functions to the leaves and internal nodes of the expression. The order of arguments is: empty, vertex, overlay and connect. Complexity: O(s) applications of the given functions. As an example, the complexity of size is O(s), since const and + have constant costs.

Good consumer.

foldg empty vertex        overlay connect        == id
foldg empty vertex        overlay (flip connect) == transpose
foldg 1     (const 1)     (+)     (+)            == size
foldg True  (const False) (&&)    (&&)           == isEmpty
foldg False (== x)        (||)    (||)           == hasVertex x

buildg :: (forall r. r -> (a -> r) -> (r -> r -> r) -> (r -> r -> r) -> r) -> Graph a Source #

Build a graph given an interpretation of the four graph construction primitives empty, vertex, overlay and connect, in this order. See examples for further clarification.

Functions expressed with buildg are good producers.

buildg f                                                   == f empty vertex overlay connect
buildg (\e _ _ _ -> e)                                     == empty
buildg (\_ v _ _ -> v x)                                   == vertex x
buildg (\e v o c -> o (foldg e v o c x) (foldg e v o c y)) == overlay x y
buildg (\e v o c -> c (foldg e v o c x) (foldg e v o c y)) == connect x y
buildg (\e v o _ -> foldr o e (map v xs))                  == vertices xs
buildg (\e v o c -> foldg e v o (flip c) g)                == transpose g
foldg e v o c (buildg f)                                   == f e v o c

Relations on graphs

isSubgraphOf :: Ord a => Graph a -> Graph a -> Bool Source #

The isSubgraphOf function takes two graphs and returns True if the first graph is a subgraph of the second. Complexity: O(s + m * log(m)) time. Note that the number of edges m of a graph can be quadratic with respect to the expression size s.

Good consumer of both arguments.

isSubgraphOf empty         x             ==  True
isSubgraphOf (vertex x)    empty         ==  False
isSubgraphOf x             (overlay x y) ==  True
isSubgraphOf (overlay x y) (connect x y) ==  True
isSubgraphOf (path xs)     (circuit xs)  ==  True
isSubgraphOf x y                         ==> x <= y

(===) :: Eq a => Graph a -> Graph a -> Bool infix 4 Source #

Structural equality on graph expressions. Complexity: O(s) time.

    x === x         == True
    x === x + empty == False
x + y === x + y     == True
1 + 2 === 2 + 1     == False
x + y === x * y     == False

Graph properties

isEmpty :: Graph a -> Bool Source #

Check if a graph is empty. Complexity: O(s) time.

Good consumer.

isEmpty empty                       == True
isEmpty (overlay empty empty)       == True
isEmpty (vertex x)                  == False
isEmpty (removeVertex x $ vertex x) == True
isEmpty (removeEdge x y $ edge x y) == False

size :: Graph a -> Int Source #

The size of a graph, i.e. the number of leaves of the expression including empty leaves. Complexity: O(s) time.

Good consumer.

size empty         == 1
size (vertex x)    == 1
size (overlay x y) == size x + size y
size (connect x y) == size x + size y
size x             >= 1
size x             >= vertexCount x

hasVertex :: Eq a => a -> Graph a -> Bool Source #

Check if a graph contains a given vertex. Complexity: O(s) time.

Good consumer.

hasVertex x empty            == False
hasVertex x (vertex y)       == (x == y)
hasVertex x . removeVertex x == const False

hasEdge :: Eq a => a -> a -> Graph a -> Bool Source #

Check if a graph contains a given edge. Complexity: O(s) time.

Good consumer.

hasEdge x y empty            == False
hasEdge x y (vertex z)       == False
hasEdge x y (edge x y)       == True
hasEdge x y . removeEdge x y == const False
hasEdge x y                  == elem (x,y) . edgeList

vertexCount :: Ord a => Graph a -> Int Source #

The number of vertices in a graph. Complexity: O(s * log(n)) time.

Good consumer.

vertexCount empty             ==  0
vertexCount (vertex x)        ==  1
vertexCount                   ==  length . vertexList
vertexCount x < vertexCount y ==> x < y

edgeCount :: Ord a => Graph a -> Int Source #

The number of edges in a graph. Complexity: O(s + m * log(m)) time. Note that the number of edges m of a graph can be quadratic with respect to the expression size s.

Good consumer.

edgeCount empty      == 0
edgeCount (vertex x) == 0
edgeCount (edge x y) == 1
edgeCount            == length . edgeList

vertexList :: Ord a => Graph a -> [a] Source #

The sorted list of vertices of a given graph. Complexity: O(s * log(n)) time and O(n) memory.

Good consumer of graphs and producer of lists.

vertexList empty      == []
vertexList (vertex x) == [x]
vertexList . vertices == nub . sort

edgeList :: Ord a => Graph a -> [(a, a)] Source #

The sorted list of edges of a graph. Complexity: O(s + m * log(m)) time and O(m) memory. Note that the number of edges m of a graph can be quadratic with respect to the expression size s.

Good consumer of graphs and producer of lists.

edgeList empty          == []
edgeList (vertex x)     == []
edgeList (edge x y)     == [(x,y)]
edgeList (star 2 [3,1]) == [(2,1), (2,3)]
edgeList . edges        == nub . sort
edgeList . transpose    == sort . map swap . edgeList

vertexSet :: Ord a => Graph a -> Set a Source #

The set of vertices of a given graph. Complexity: O(s * log(n)) time and O(n) memory.

Good consumer.

vertexSet empty      == Set.empty
vertexSet . vertex   == Set.singleton
vertexSet . vertices == Set.fromList

edgeSet :: Ord a => Graph a -> Set (a, a) Source #

The set of edges of a given graph. Complexity: O(s * log(m)) time and O(m) memory.

Good consumer.

edgeSet empty      == Set.empty
edgeSet (vertex x) == Set.empty
edgeSet (edge x y) == Set.singleton (x,y)
edgeSet . edges    == Set.fromList

adjacencyList :: Ord a => Graph a -> [(a, [a])] Source #

The sorted adjacency list of a graph. Complexity: O(n + m) time and memory.

Good consumer.

adjacencyList empty          == []
adjacencyList (vertex x)     == [(x, [])]
adjacencyList (edge 1 2)     == [(1, [2]), (2, [])]
adjacencyList (star 2 [3,1]) == [(1, []), (2, [1,3]), (3, [])]
stars . adjacencyList        == id

Standard families of graphs

path :: [a] -> Graph a Source #

The path on a list of vertices. Complexity: O(L) time, memory and size, where L is the length of the given list.

Good producer.

path []        == empty
path [x]       == vertex x
path [x,y]     == edge x y
path . reverse == transpose . path

circuit :: [a] -> Graph a Source #

The circuit on a list of vertices. Complexity: O(L) time, memory and size, where L is the length of the given list.

Good producer.

circuit []        == empty
circuit [x]       == edge x x
circuit [x,y]     == edges [(x,y), (y,x)]
circuit . reverse == transpose . circuit

clique :: [a] -> Graph a Source #

The clique on a list of vertices. Complexity: O(L) time, memory and size, where L is the length of the given list.

Good consumer of lists and producer of graphs.

clique []         == empty
clique [x]        == vertex x
clique [x,y]      == edge x y
clique [x,y,z]    == edges [(x,y), (x,z), (y,z)]
clique (xs ++ ys) == connect (clique xs) (clique ys)
clique . reverse  == transpose . clique

biclique :: [a] -> [a] -> Graph a Source #

The biclique on two lists of vertices. Complexity: O(L1 + L2) time, memory and size, where L1 and L2 are the lengths of the given lists.

Good consumer of both arguments and producer of graphs.

biclique []      []      == empty
biclique [x]     []      == vertex x
biclique []      [y]     == vertex y
biclique [x1,x2] [y1,y2] == edges [(x1,y1), (x1,y2), (x2,y1), (x2,y2)]
biclique xs      ys      == connect (vertices xs) (vertices ys)

star :: a -> [a] -> Graph a Source #

The star formed by a centre vertex connected to a list of leaves. Complexity: O(L) time, memory and size, where L is the length of the given list.

Good consumer of lists and good producer of graphs.

star x []    == vertex x
star x [y]   == edge x y
star x [y,z] == edges [(x,y), (x,z)]
star x ys    == connect (vertex x) (vertices ys)

stars :: [(a, [a])] -> Graph a Source #

The stars formed by overlaying a list of stars. An inverse of adjacencyList. Complexity: O(L) time, memory and size, where L is the total size of the input.

Good consumer of lists and producer of graphs.

stars []                      == empty
stars [(x, [])]               == vertex x
stars [(x, [y])]              == edge x y
stars [(x, ys)]               == star x ys
stars                         == overlays . map (uncurry star)
stars . adjacencyList         == id
overlay (stars xs) (stars ys) == stars (xs ++ ys)

tree :: Tree a -> Graph a Source #

The tree graph constructed from a given Tree data structure. Complexity: O(T) time, memory and size, where T is the size of the given tree (i.e. the number of vertices in the tree).

tree (Node x [])                                         == vertex x
tree (Node x [Node y [Node z []]])                       == path [x,y,z]
tree (Node x [Node y [], Node z []])                     == star x [y,z]
tree (Node 1 [Node 2 [], Node 3 [Node 4 [], Node 5 []]]) == edges [(1,2), (1,3), (3,4), (3,5)]

forest :: Forest a -> Graph a Source #

The forest graph constructed from a given Forest data structure. Complexity: O(F) time, memory and size, where F is the size of the given forest (i.e. the number of vertices in the forest).

forest []                                                  == empty
forest [x]                                                 == tree x
forest [Node 1 [Node 2 [], Node 3 []], Node 4 [Node 5 []]] == edges [(1,2), (1,3), (4,5)]
forest                                                     == overlays . map tree

mesh :: [a] -> [b] -> Graph (a, b) Source #

Construct a mesh graph from two lists of vertices. Complexity: O(L1 * L2) time, memory and size, where L1 and L2 are the lengths of the given lists.

mesh xs     []   == empty
mesh []     ys   == empty
mesh [x]    [y]  == vertex (x, y)
mesh xs     ys   == box (path xs) (path ys)
mesh [1..3] "ab" == edges [ ((1,'a'),(1,'b')), ((1,'a'),(2,'a')), ((1,'b'),(2,'b')), ((2,'a'),(2,'b'))
                          , ((2,'a'),(3,'a')), ((2,'b'),(3,'b')), ((3,'a'),(3,'b')) ]

torus :: [a] -> [b] -> Graph (a, b) Source #

Construct a torus graph from two lists of vertices. Complexity: O(L1 * L2) time, memory and size, where L1 and L2 are the lengths of the given lists.

torus xs    []   == empty
torus []    ys   == empty
torus [x]   [y]  == edge (x,y) (x,y)
torus xs    ys   == box (circuit xs) (circuit ys)
torus [1,2] "ab" == edges [ ((1,'a'),(1,'b')), ((1,'a'),(2,'a')), ((1,'b'),(1,'a')), ((1,'b'),(2,'b'))
                          , ((2,'a'),(1,'a')), ((2,'a'),(2,'b')), ((2,'b'),(1,'b')), ((2,'b'),(2,'a')) ]

deBruijn :: Int -> [a] -> Graph [a] Source #

Construct a De Bruijn graph of a given non-negative dimension using symbols from a given alphabet. Complexity: O(A^(D + 1)) time, memory and size, where A is the size of the alphabet and D is the dimension of the graph.

          deBruijn 0 xs               == edge [] []
n > 0 ==> deBruijn n []               == empty
          deBruijn 1 [0,1]            == edges [ ([0],[0]), ([0],[1]), ([1],[0]), ([1],[1]) ]
          deBruijn 2 "0"              == edge "00" "00"
          deBruijn 2 "01"             == edges [ ("00","00"), ("00","01"), ("01","10"), ("01","11")
                                               , ("10","00"), ("10","01"), ("11","10"), ("11","11") ]
          transpose   (deBruijn n xs) == fmap reverse $ deBruijn n xs
          vertexCount (deBruijn n xs) == (length $ nub xs)^n
n > 0 ==> edgeCount   (deBruijn n xs) == (length $ nub xs)^(n + 1)

Graph transformation

removeVertex :: Eq a => a -> Graph a -> Graph a Source #

Remove a vertex from a given graph. Complexity: O(s) time, memory and size.

Good consumer and producer.

removeVertex x (vertex x)       == empty
removeVertex 1 (vertex 2)       == vertex 2
removeVertex x (edge x x)       == empty
removeVertex 1 (edge 1 2)       == vertex 2
removeVertex x . removeVertex x == removeVertex x

removeEdge :: Eq a => a -> a -> Graph a -> Graph a Source #

Remove an edge from a given graph. Complexity: O(s) time, memory and size.

removeEdge x y (edge x y)       == vertices [x,y]
removeEdge x y . removeEdge x y == removeEdge x y
removeEdge x y . removeVertex x == removeVertex x
removeEdge 1 1 (1 * 1 * 2 * 2)  == 1 * 2 * 2
removeEdge 1 2 (1 * 1 * 2 * 2)  == 1 * 1 + 2 * 2
size (removeEdge x y z)         <= 3 * size z

replaceVertex :: Eq a => a -> a -> Graph a -> Graph a Source #

The function replaceVertex x y replaces vertex x with vertex y in a given Graph. If y already exists, x and y will be merged. Complexity: O(s) time, memory and size.

Good consumer and producer.

replaceVertex x x            == id
replaceVertex x y (vertex x) == vertex y
replaceVertex x y            == mergeVertices (== x) y

mergeVertices :: (a -> Bool) -> a -> Graph a -> Graph a Source #

Merge vertices satisfying a given predicate into a given vertex. Complexity: O(s) time, memory and size, assuming that the predicate takes constant time.

Good consumer and producer.

mergeVertices (const False) x    == id
mergeVertices (== x) y           == replaceVertex x y
mergeVertices even 1 (0 * 2)     == 1 * 1
mergeVertices odd  1 (3 + 4 * 5) == 4 * 1

splitVertex :: Eq a => a -> [a] -> Graph a -> Graph a Source #

Split a vertex into a list of vertices with the same connectivity. Complexity: O(s + k * L) time, memory and size, where k is the number of occurrences of the vertex in the expression and L is the length of the given list.

Good consumer of lists and producer of graphs.

splitVertex x []                  == removeVertex x
splitVertex x [x]                 == id
splitVertex x [y]                 == replaceVertex x y
splitVertex 1 [0,1] $ 1 * (2 + 3) == (0 + 1) * (2 + 3)

transpose :: Graph a -> Graph a Source #

Transpose a given graph. Complexity: O(s) time, memory and size.

Good consumer and producer.

transpose empty       == empty
transpose (vertex x)  == vertex x
transpose (edge x y)  == edge y x
transpose . transpose == id
transpose (box x y)   == box (transpose x) (transpose y)
edgeList . transpose  == sort . map swap . edgeList

induce :: (a -> Bool) -> Graph a -> Graph a Source #

Construct the induced subgraph of a given graph by removing the vertices that do not satisfy a given predicate. Complexity: O(s) time, memory and size, assuming that the predicate takes constant time.

Good consumer and producer.

induce (const True ) x      == x
induce (const False) x      == empty
induce (/= x)               == removeVertex x
induce p . induce q         == induce (\x -> p x && q x)
isSubgraphOf (induce p x) x == True

induceJust :: Graph (Maybe a) -> Graph a Source #

Construct the induced subgraph of a given graph by removing the vertices that are Nothing. Complexity: O(s) time, memory and size.

Good consumer and producer.

induceJust (vertex Nothing)                               == empty
induceJust (edge (Just x) Nothing)                        == vertex x
induceJust . fmap Just                                    == id
induceJust . fmap (\x -> if p x then Just x else Nothing) == induce p

simplify :: Ord a => Graph a -> Graph a Source #

Simplify a graph expression. Semantically, this is the identity function, but it simplifies a given expression according to the laws of the algebra. The function does not compute the simplest possible expression, but uses heuristics to obtain useful simplifications in reasonable time. Complexity: the function performs O(s) graph comparisons. It is guaranteed that the size of the result does not exceed the size of the given expression.

Good consumer.

simplify              == id
size (simplify x)     <= size x
simplify empty       === empty
simplify 1           === 1
simplify (1 + 1)     === 1
simplify (1 + 2 + 1) === 1 + 2
simplify (1 * 1 * 1) === 1 * 1

sparsify :: Graph a -> Graph (Either Int a) Source #

Sparsify a graph by adding intermediate Left Int vertices between the original vertices (wrapping the latter in Right) such that the resulting graph is sparse, i.e. contains only O(s) edges, but preserves the reachability relation between the original vertices. Sparsification is useful when working with dense graphs, as it can reduce the number of edges from O(n^2) down to O(n) by replacing cliques, bicliques and similar densely connected structures by sparse subgraphs built out of intermediate vertices. Complexity: O(s) time, memory and size.

sort . reachable x       == sort . rights . reachable (Right x) . sparsify
vertexCount (sparsify x) <= vertexCount x + size x + 1
edgeCount   (sparsify x) <= 3 * size x
size        (sparsify x) <= 3 * size x

sparsifyKL :: Int -> Graph Int -> Graph Source #

Sparsify a graph whose vertices are integers in the range [1..n], where n is the first argument of the function, producing an array-based graph representation from Data.Graph (introduced by King and Launchbury, hence the name of the function). In the resulting graph, vertices [1..n] correspond to the original vertices, and all vertices greater than n are introduced by the sparsification procedure.

Complexity: O(s) time and memory. Note that thanks to sparsification, the resulting graph has a linear number of edges with respect to the size of the original algebraic representation even though the latter can potentially contain a quadratic O(s^2) number of edges.

sort . reachable k                 == sort . filter (<= n) . flip reachable k . sparsifyKL n
length (vertices $ sparsifyKL n x) <= vertexCount x + size x + 1
length (edges    $ sparsifyKL n x) <= 3 * size x

Graph composition

compose :: Ord a => Graph a -> Graph a -> Graph a Source #

Left-to-right relational composition of graphs: vertices x and z are connected in the resulting graph if there is a vertex y, such that x is connected to y in the first graph, and y is connected to z in the second graph. There are no isolated vertices in the result. This operation is associative, has empty and single-vertex graphs as annihilating zeroes, and distributes over overlay. Complexity: O(n * m * log(n)) time, O(n + m) memory, and O(m1 + m2) size, where n and m stand for the number of vertices and edges in the resulting graph, while m1 and m2 are the number of edges in the original graphs. Note that the number of edges in the resulting graph may be quadratic, i.e. m = O(m1 * m2), but the algebraic representation requires only O(m1 + m2) operations to list them.

Good consumer of both arguments and good producer.

compose empty            x                == empty
compose x                empty            == empty
compose (vertex x)       y                == empty
compose x                (vertex y)       == empty
compose x                (compose y z)    == compose (compose x y) z
compose x                (overlay y z)    == overlay (compose x y) (compose x z)
compose (overlay x y)    z                == overlay (compose x z) (compose y z)
compose (edge x y)       (edge y z)       == edge x z
compose (path    [1..5]) (path    [1..5]) == edges [(1,3), (2,4), (3,5)]
compose (circuit [1..5]) (circuit [1..5]) == circuit [1,3,5,2,4]
size (compose x y)                        <= edgeCount x + edgeCount y + 1

box :: Graph a -> Graph b -> Graph (a, b) Source #

Compute the Cartesian product of graphs. Complexity: O(s1 * s2) time, memory and size, where s1 and s2 are the sizes of the given graphs.

box (path [0,1]) (path "ab") == edges [ ((0,'a'), (0,'b'))
                                      , ((0,'a'), (1,'a'))
                                      , ((0,'b'), (1,'b'))
                                      , ((1,'a'), (1,'b')) ]

Up to isomorphism between the resulting vertex types, this operation is commutative, associative, distributes over overlay, has singleton graphs as identities and empty as the annihilating zero. Below ~~ stands for equality up to an isomorphism, e.g. (x, ()) ~~ x.

box x y               ~~ box y x
box x (box y z)       ~~ box (box x y) z
box x (overlay y z)   == overlay (box x y) (box x z)
box x (vertex ())     ~~ x
box x empty           ~~ empty
transpose   (box x y) == box (transpose x) (transpose y)
vertexCount (box x y) == vertexCount x * vertexCount y
edgeCount   (box x y) <= vertexCount x * edgeCount y + edgeCount x * vertexCount y

Context

data Context a Source #

The Context of a subgraph comprises its inputs and outputs, i.e. all the vertices that are connected to the subgraph's vertices. Note that inputs and outputs can belong to the subgraph itself. In general, there are no guarantees on the order of vertices in inputs and outputs; furthermore, there may be repetitions.

Constructors

Context 

Fields

Instances

Instances details
Eq a => Eq (Context a) Source # 
Instance details

Defined in Algebra.Graph

Methods

(==) :: Context a -> Context a -> Bool #

(/=) :: Context a -> Context a -> Bool #

Show a => Show (Context a) Source # 
Instance details

Defined in Algebra.Graph

Methods

showsPrec :: Int -> Context a -> ShowS #

show :: Context a -> String #

showList :: [Context a] -> ShowS #

context :: (a -> Bool) -> Graph a -> Maybe (Context a) Source #

Extract the Context of a subgraph specified by a given predicate. Returns Nothing if the specified subgraph is empty.

Good consumer.

context (const False) x                   == Nothing
context (== 1)        (edge 1 2)          == Just (Context [   ] [2  ])
context (== 2)        (edge 1 2)          == Just (Context [1  ] [   ])
context (const True ) (edge 1 2)          == Just (Context [1  ] [2  ])
context (== 4)        (3 * 1 * 4 * 1 * 5) == Just (Context [3,1] [1,5])