Build #1 for biosff-0.3.7
| Package | biosff-0.3.7 |
|---|
| Install | BuildFailed |
|---|---|
| Docs | NotTried |
| Tests | NotTried |
| Time submitted | unknown |
|---|---|
| Compiler | ghc-7.6.3 |
| OS | linux |
| Arch | x86_64 |
| Dependencies | mtl-2.1.2, cmdargs-0.10.5, bytestring-0.10.0.2, biocore-0.3.1, binary-0.5.1.1, base-4.6.0.1, array-0.4.0.1 |
| Flags | frecover flower fclip |
Code Coverage
No Code Coverage was submitted for this report.
Build log
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Configuring biosff-0.3.7...
Flags chosen: fclip=True, frecover=True, flower=True
Dependency array ==0.4.0.1: using array-0.4.0.1
Dependency base ==4.6.0.1: using base-4.6.0.1
Dependency binary ==0.5.1.1: using binary-0.5.1.1
Dependency biocore ==0.3.1: using biocore-0.3.1
Dependency bytestring ==0.10.0.2: using bytestring-0.10.0.2
Dependency cmdargs ==0.10.5: using cmdargs-0.10.5
Dependency mtl ==2.1.2: using mtl-2.1.2
Using Cabal-1.16.0.3 compiled by ghc-7.6
Using compiler: ghc-7.6.3
Using install prefix: /srv/hackage/var/build/cache/inst
Binaries installed in: /srv/hackage/var/build/cache/inst/bin
Libraries installed in:
/srv/hackage/var/build/cache/inst/lib/biosff-0.3.7/ghc-7.6.3
Private binaries installed in: /srv/hackage/var/build/cache/inst/libexec
Data files installed in: /srv/hackage/var/build/cache/inst/share/biosff-0.3.7
Documentation installed in:
/srv/hackage/var/build/cache/inst/share/doc/biosff-0.3.7
Using alex version 3.0.1 found on system at: /usr/bin/alex
Using ar found on system at: /usr/bin/ar
No c2hs found
No cpphs found
No ffihugs found
Using gcc version 4.7 found on system at: /usr/bin/gcc
Using ghc version 7.6.3 found on system at: /usr/local/bin/ghc
Using ghc-pkg version 7.6.3 found on system at: /usr/local/bin/ghc-pkg
No greencard found
Using haddock version 2.13.2 found on system at: /usr/local/bin/haddock
Using happy version 1.18.9 found on system at: /usr/bin/happy
No hmake found
Using hpc version 0.6 found on system at: /usr/local/bin/hpc
Using hsc2hs version 0.67 found on system at: /usr/local/bin/hsc2hs
Using hscolour version 1.19 found on system at: /usr/bin/HsColour
No hugs found
No jhc found
Using ld found on system at: /usr/bin/ld
No lhc found
No lhc-pkg found
No nhc98 found
No pkg-config found
Using ranlib found on system at: /usr/bin/ranlib
Using strip found on system at: /usr/bin/strip
Using tar found on system at: /bin/tar
No uhc found
creating dist/build
creating dist/build/autogen
Building biosff-0.3.7...
Preprocessing library biosff-0.3.7...
Building library...
creating dist/build
/usr/local/bin/ghc --make -fbuilding-cabal-package -odir dist/build -hidir dist/build -stubdir dist/build -i -idist/build -isrc -idist/build/autogen -Idist/build/autogen -Idist/build -optP-include -optPdist/build/autogen/cabal_macros.h -package-name biosff-0.3.7 -hide-all-packages -package-db /srv/hackage/var/build/cache/inst/local.conf.d -package-db dist/package.conf.inplace -package-id array-0.4.0.1-3b78425c10ff2dad7acf7e8c8ae014c3 -package-id base-4.6.0.1-8aa5d403c45ea59dcd2c39f123e27d57 -package-id binary-0.5.1.1-72ed744c57c32286a49da6dda4f660b7 -package-id biocore-0.3.1-844338491e9820bc91c6fb7f50c146c5 -package-id bytestring-0.10.0.2-4f93248f75667c2c3321a7a6761b576f -package-id cmdargs-0.10.5-e8b67b60f45290a711fd0a44f15fd8df -package-id mtl-2.1.2-94c72af955e94b8d7b2f359dadd0cb62 -XHaskell98 Bio.Sequence.SFF Bio.Sequence.SFF_filters Bio.Sequence.SFF_name -Wall -O0
[1 of 3] Compiling Bio.Sequence.SFF_name ( src/Bio/Sequence/SFF_name.hs, dist/build/Bio/Sequence/SFF_name.o )
[2 of 3] Compiling Bio.Sequence.SFF ( src/Bio/Sequence/SFF.hs, dist/build/Bio/Sequence/SFF.o )
[3 of 3] Compiling Bio.Sequence.SFF_filters ( src/Bio/Sequence/SFF_filters.hs, dist/build/Bio/Sequence/SFF_filters.o )
Linking...
/usr/bin/ar -r dist/build/libHSbiosff-0.3.7.a dist/build/Bio/Sequence/SFF.o dist/build/Bio/Sequence/SFF_filters.o dist/build/Bio/Sequence/SFF_name.o
/usr/bin/ar: creating dist/build/libHSbiosff-0.3.7.a
In-place registering biosff-0.3.7...
/usr/local/bin/ghc-pkg update - --global --user --package-db=/srv/hackage/var/build/cache/inst/local.conf.d --package-db=dist/package.conf.inplace --no-user-package-conf
Preprocessing executable 'frecover' for biosff-0.3.7...
Building executable frecover...
creating dist/build/frecover
creating dist/build/frecover/frecover-tmp
/usr/local/bin/ghc --make -fbuilding-cabal-package -odir dist/build/frecover/frecover-tmp -hidir dist/build/frecover/frecover-tmp -stubdir dist/build/frecover/frecover-tmp -i -idist/build/frecover/frecover-tmp -isrc -isrc/FRecover -idist/build/autogen -Idist/build/autogen -Idist/build/frecover/frecover-tmp -optP-include -optPdist/build/autogen/cabal_macros.h -hide-all-packages -package-db /srv/hackage/var/build/cache/inst/local.conf.d -package-db dist/package.conf.inplace -package-id array-0.4.0.1-3b78425c10ff2dad7acf7e8c8ae014c3 -package-id base-4.6.0.1-8aa5d403c45ea59dcd2c39f123e27d57 -package-id binary-0.5.1.1-72ed744c57c32286a49da6dda4f660b7 -package-id biocore-0.3.1-844338491e9820bc91c6fb7f50c146c5 -package-id bytestring-0.10.0.2-4f93248f75667c2c3321a7a6761b576f -package-id cmdargs-0.10.5-e8b67b60f45290a711fd0a44f15fd8df -package-id mtl-2.1.2-94c72af955e94b8d7b2f359dadd0cb62 -XHaskell98 src/FRecover/Main.hs -o dist/build/frecover/frecover -Wall -O0
[1 of 3] Compiling Bio.Sequence.SFF_name ( src/Bio/Sequence/SFF_name.hs, dist/build/frecover/frecover-tmp/Bio/Sequence/SFF_name.o )
[2 of 3] Compiling Bio.Sequence.SFF ( src/Bio/Sequence/SFF.hs, dist/build/frecover/frecover-tmp/Bio/Sequence/SFF.o )
[3 of 3] Compiling Main ( src/FRecover/Main.hs, dist/build/frecover/frecover-tmp/Main.o )
Linking dist/build/frecover/frecover ...
Preprocessing executable 'flower' for biosff-0.3.7...
Building executable flower...
creating dist/build/flower
creating dist/build/flower/flower-tmp
/usr/local/bin/ghc --make -fbuilding-cabal-package -odir dist/build/flower/flower-tmp -hidir dist/build/flower/flower-tmp -stubdir dist/build/flower/flower-tmp -i -idist/build/flower/flower-tmp -isrc -isrc/Flower -idist/build/autogen -Idist/build/autogen -Idist/build/flower/flower-tmp -optP-include -optPdist/build/autogen/cabal_macros.h -hide-all-packages -package-db /srv/hackage/var/build/cache/inst/local.conf.d -package-db dist/package.conf.inplace -package-id array-0.4.0.1-3b78425c10ff2dad7acf7e8c8ae014c3 -package-id base-4.6.0.1-8aa5d403c45ea59dcd2c39f123e27d57 -package-id binary-0.5.1.1-72ed744c57c32286a49da6dda4f660b7 -package-id biocore-0.3.1-844338491e9820bc91c6fb7f50c146c5 -package-id bytestring-0.10.0.2-4f93248f75667c2c3321a7a6761b576f -package-id cmdargs-0.10.5-e8b67b60f45290a711fd0a44f15fd8df -package-id mtl-2.1.2-94c72af955e94b8d7b2f359dadd0cb62 -XHaskell98 src/Flower/Main.hs -o dist/build/flower/flower -Wall -O0
[1 of 8] Compiling Bio.Sequence.SFF_name ( src/Bio/Sequence/SFF_name.hs, dist/build/flower/flower-tmp/Bio/Sequence/SFF_name.o )
[2 of 8] Compiling Fork ( src/Flower/Fork.hs, dist/build/flower/flower-tmp/Fork.o )
[3 of 8] Compiling Options ( src/Flower/Options.hs, dist/build/flower/flower-tmp/Options.o )
[4 of 8] Compiling Bio.Sequence.SFF ( src/Bio/Sequence/SFF.hs, dist/build/flower/flower-tmp/Bio/Sequence/SFF.o )
[5 of 8] Compiling Bio.Sequence.SFF_filters ( src/Bio/Sequence/SFF_filters.hs, dist/build/flower/flower-tmp/Bio/Sequence/SFF_filters.o )
[6 of 8] Compiling Metrics ( src/Flower/Metrics.hs, dist/build/flower/flower-tmp/Metrics.o )
[7 of 8] Compiling Print ( src/Flower/Print.hs, dist/build/flower/flower-tmp/Print.o )
[8 of 8] Compiling Main ( src/Flower/Main.hs, dist/build/flower/flower-tmp/Main.o )
src/Flower/Main.hs:76:1: Warning: Defined but not used: `isEmpty'
src/Flower/Main.hs:76:1: Warning:
Top-level binding with no type signature:
isEmpty :: forall t. t -> Bool
src/Flower/Main.hs:76:9: Warning: Defined but not used: `r'
Linking dist/build/flower/flower ...
Preprocessing executable 'fclip' for biosff-0.3.7...
Building executable fclip...
creating dist/build/fclip
creating dist/build/fclip/fclip-tmp
/usr/local/bin/ghc --make -fbuilding-cabal-package -odir dist/build/fclip/fclip-tmp -hidir dist/build/fclip/fclip-tmp -stubdir dist/build/fclip/fclip-tmp -i -idist/build/fclip/fclip-tmp -isrc -isrc/FClip -idist/build/autogen -Idist/build/autogen -Idist/build/fclip/fclip-tmp -optP-include -optPdist/build/autogen/cabal_macros.h -hide-all-packages -package-db /srv/hackage/var/build/cache/inst/local.conf.d -package-db dist/package.conf.inplace -package-id array-0.4.0.1-3b78425c10ff2dad7acf7e8c8ae014c3 -package-id base-4.6.0.1-8aa5d403c45ea59dcd2c39f123e27d57 -package-id binary-0.5.1.1-72ed744c57c32286a49da6dda4f660b7 -package-id biocore-0.3.1-844338491e9820bc91c6fb7f50c146c5 -package-id bytestring-0.10.0.2-4f93248f75667c2c3321a7a6761b576f -package-id cmdargs-0.10.5-e8b67b60f45290a711fd0a44f15fd8df -package-id mtl-2.1.2-94c72af955e94b8d7b2f359dadd0cb62 -XHaskell98 src/FClip/Main.hs -o dist/build/fclip/fclip -Wall -O0
src/FClip/Main.hs:4:18:
Could not find module `Options'
Use -v to see a list of the files searched for.
Test log
No test log was submitted for this report.