The biosff package

[Tags:lgpl, library]

The library contains the functionality for reading and writing SFF files (sequencing data from 454 and Ion Torrent). It duplicates code from (and is incompatible with) the bio library.

Properties

Versions 0.1, 0.2, 0.3.1, 0.3.2, 0.3.3, 0.3.4, 0.3.5, 0.3.7, 0.3.7.1
Dependencies array (>=0.4), base (>=3 && <5), binary, biocore (>=0.3), bytestring, cmdargs, mtl (>=2) [details]
License LGPL-2.1
Author Ketil Malde
Maintainer ketil@malde.org
Stability Experimental
Category Bioinformatics
Home page http://biohaskell.org/
Source repository head: darcs get http://malde.org/~ketil/biohaskell/biosff
this: darcs get http://malde.org/~ketil/biohaskell/biosff --tag 0.3.7
Uploaded Sat Sep 28 09:04:26 UTC 2013 by KetilMalde
Distributions NixOS:0.3.7.1
Downloads 2380 total (22 in the last 30 days)
Votes
0 []
Status Docs uploaded by user [build log]
All reported builds failed [all 1 reports]

Modules

  • Bio
    • Sequence
      • Bio.Sequence.SFF
      • Bio.Sequence.SFF_filters

[Index]

Flags

NameDescriptionDefaultType
flowerBuild the 'flower' executable.EnabledAutomatic
frecoverBuild the 'frecover' executable.EnabledAutomatic
fclipBuild the 'fclip' executable.EnabledAutomatic

Use -f <flag> to enable a flag, or -f -<flag> to disable that flag. More info

Downloads

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