module Bio.Uniprot
( module T
, parseRecord
, fetch
) where
import Data.Text.Encoding ( decodeUtf8 )
import Data.String ( IsString(..) )
import Data.Attoparsec.Text ( parseOnly )
import Control.Monad.IO.Class ( MonadIO )
import Network.HTTP.Simple ( httpBS, getResponseBody )
import Bio.Uniprot.Type as T
import Bio.Uniprot.Parser
fetch :: MonadIO m => String -> m Record
fetch recid = do let url = fromString $ "https://www.uniprot.org/uniprot/" <> recid <> ".txt"
resp <- httpBS url
case parseOnly parseRecord (decodeUtf8 $ getResponseBody resp) of
Left err -> fail err
Right r -> pure r