collapse-duplication: Collapse the duplication output into clones and return their frequencies.

[ bioinformatics, gpl, library, program ] [ Propose Tags ]

Process the output of heatitup in order to collapse sequences into clones by similar ITD mutations.

Versions 0.4.0.1
Dependencies base (>=4.7 && <5), bytestring, bytestring-show, cassava, collapse-duplication, containers, hierarchical-clustering, lens, optparse-generic, split [details]
License GPL-3.0-only
Copyright Copyright: (c) 2018 Gregory W. Schwartz
Author Gregory W. Schwartz
Maintainer gsch@mail.med.upenn.edu
Category Bioinformatics
Home page http://github.com/GregorySchwartz/collapse-duplication#readme
Source repo head: git clone https://github.com/GregorySchwartz/collapse-duplication
Uploaded by GregorySchwartz at Tue Aug 28 19:24:34 UTC 2018
Distributions NixOS:0.4.0.1
Executables collapse-duplication
Downloads 56 total (12 in the last 30 days)
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Status Docs available [build log]
Last success reported on 2018-08-28 [all 1 reports]
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