The estreps package
rselect - select a random set of sequences from a FASTA file, optinally with random orientation (forward/reverse complement). * reps - extract exact k-word repeats based that occur in sequences grouped in different clusters.
The Darcs repository is at: http://malde.org/~ketil/biohaskell/estreps.
Properties
| Versions | 0.1, 0.3, 0.3.1 |
|---|---|
| Dependencies | base (>3 & <4), bio (≥0.4), bytestring, containers, random |
| License | GPL |
| Author | Ketil Malde |
| Maintainer | Ketil Malde <ketil@malde.org> |
| Stability | Beta |
| Category | Bioinformatics |
| Home page | http://blog.malde.org/ |
| Executables | reps, rselect |
| Upload date | Wed Oct 7 13:01:48 UTC 2009 |
| Uploaded by | KetilMalde |
| Build failure | ghc-6.10 (log) |
Downloads
- estreps-0.3.1.tar.gz (Cabal source package)
- package description (included in the package)