Types

Documentation

data NodeLabel

Constructors

NodeLabel

Fields

• nodeID :: !Text
• nodeLabels :: !Labels

Instances

Eq NodeLabel

Methods

(==) :: NodeLabel -> NodeLabel -> Bool

(/=) :: NodeLabel -> NodeLabel -> Bool

Ord NodeLabel

Methods

compare :: NodeLabel -> NodeLabel -> Ordering

(<) :: NodeLabel -> NodeLabel -> Bool

(<=) :: NodeLabel -> NodeLabel -> Bool

(>) :: NodeLabel -> NodeLabel -> Bool

(>=) :: NodeLabel -> NodeLabel -> Bool

max :: NodeLabel -> NodeLabel -> NodeLabel

min :: NodeLabel -> NodeLabel -> NodeLabel

Read NodeLabel

Methods

readsPrec :: Int -> ReadS NodeLabel

readList :: ReadS [NodeLabel]

readPrec :: ReadPrec NodeLabel

readListPrec :: ReadPrec [NodeLabel]

Show NodeLabel

Methods

showsPrec :: Int -> NodeLabel -> ShowS

show :: NodeLabel -> String

showList :: [NodeLabel] -> ShowS

Generic NodeLabel

Associated Types

type Rep NodeLabel :: * -> *

Methods

from :: NodeLabel -> Rep NodeLabel x

to :: Rep NodeLabel x -> NodeLabel

FromJSON NodeLabel

Methods

parseJSON :: Value -> Parser NodeLabel

parseJSONList :: Value -> Parser [NodeLabel]

WorkableTree (Tree NodeLabel)

Methods

makeWorkable :: Tree NodeLabel -> Tree NodeLabel

type Rep NodeLabel

type Rep NodeLabel = D1 (MetaData "NodeLabel" "Types" "find-clumpiness-0.2.3.0-HGgP5X948szFAbFVtre7Bl" False) (C1 (MetaCons "NodeLabel" PrefixI True) ((:*:) (S1 (MetaSel (Just Symbol "nodeID") NoSourceUnpackedness SourceStrict DecidedStrict) (Rec0 Text)) (S1 (MetaSel (Just Symbol "nodeLabels") NoSourceUnpackedness SourceStrict DecidedStrict) (Rec0 Labels))))

data Format

Constructors

JSON

RJSON

Haskell HaskellFormat

Newick

Lineage Text

Instances

Read Format

Methods

readsPrec :: Int -> ReadS Format

readList :: ReadS [Format]

readPrec :: ReadPrec Format

readListPrec :: ReadPrec [Format]

data HaskellFormat

Constructors

BaseFormat

TreeFormat

DendrogramFormat

Instances

Read HaskellFormat

Methods

readsPrec :: Int -> ReadS HaskellFormat

readList :: ReadS [HaskellFormat]

readPrec :: ReadPrec HaskellFormat

readListPrec :: ReadPrec [HaskellFormat]

data Exclusivity

Constructors

Exclusive

AllExclusive

Majority

Instances

Read Exclusivity

Methods

readsPrec :: Int -> ReadS Exclusivity

readList :: ReadS [Exclusivity]

readPrec :: ReadPrec Exclusivity

readListPrec :: ReadPrec [Exclusivity]

newtype Separator

Constructors

Separator Text

Instances

Show Separator

Methods

showsPrec :: Int -> Separator -> ShowS

show :: Separator -> String

showList :: [Separator] -> ShowS

newtype Field

Constructors

Field Int

Instances

Show Field

Methods

showsPrec :: Int -> Field -> ShowS

show :: Field -> String

showList :: [Field] -> ShowS

type Label = Text

type Labels = Seq Label

class WorkableTree a where

Class of trees that can be converted to workable trees.

Minimal complete definition

makeWorkable

Methods

makeWorkable :: a -> Tree NodeLabel

Instances

WorkableTree (Tree (Seq Text))

Methods

makeWorkable :: Tree (Seq Text) -> Tree NodeLabel

WorkableTree (Tree NodeLabel)

Methods

makeWorkable :: Tree NodeLabel -> Tree NodeLabel

WorkableTree (Dendrogram (Seq Text))

Methods

makeWorkable :: Dendrogram (Seq Text) -> Tree NodeLabel