hTalos: Parser, print and manipulate structures in PDB file format.
|Dependencies||base (>=4.0 && <4.7), bytestring [details]|
|Copyright||Copyright by MPIBPC, Michal J. Gajda '2013|
|Author||Michal J. Gajda|
|Source repo||head: git clone git://github.com:mgajda/hpdb.git|
|Uploaded||by MichalGajda at Sat Nov 23 15:03:03 UTC 2013|
|Downloads||569 total (9 in the last 30 days)|
|Rating||(no votes yet) [estimated by rule of succession]|
|Status||Docs available [build log]
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Protein Data Bank file format is a most popular format for holding biomolecule data. This is a very fast parser (below 7s for the largest entry in PDB - 1HTQ which is over 70MB - as compared with 11s of RASMOL 2.7.5, or 2m15s of BioPython with Python 2.6 interpreter.) It is aimed to not only deliver event-based interface, but also a high-level data structure for manipulating data in spirit of BioPython's PDB parser.
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