The hTalos package

[ Tags: bioinformatics, bsd3, library ] [ Propose Tags ]

Protein Data Bank file format is a most popular format for holding biomolecule data. This is a very fast parser (below 7s for the largest entry in PDB - 1HTQ which is over 70MB - as compared with 11s of RASMOL 2.7.5, or 2m15s of BioPython with Python 2.6 interpreter.) It is aimed to not only deliver event-based interface, but also a high-level data structure for manipulating data in spirit of BioPython's PDB parser.


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Properties

Versions 0.2
Dependencies base (>=4.0 && <4.7), bytestring [details]
License BSD3
Copyright Copyright by MPIBPC, Michal J. Gajda '2013
Author Michal J. Gajda
Maintainer mjgajda@googlemail.com
Category Bioinformatics
Home page https://github.com/mgajda/hTalos
Bug tracker mailto:mjgajda@googlemail.com
Source repository head: git clone git://github.com:mgajda/hpdb.git
Uploaded Sat Nov 23 15:03:03 UTC 2013 by MichalGajda
Distributions NixOS:0.2
Downloads 428 total (13 in the last 30 days)
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Status Docs available [build log]
Successful builds reported [all 2 reports]
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Readme for hTalos-0.2

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hTalos

Running TALOS+ and parsing its output.

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Details on official releases are on Hackage.