Data.SAM.Version1_6.Alignment.HOPT

WARNING

This module is considered internal.

The Package Versioning Policy does not apply.

The contents of this module may change in any way whatsoever and without any warning between minor versions of this package.

Authors importing this library are expected to track development closely.

All credit goes to the author(s)/maintainer(s) of the containers library for the above warning text.

Description

This library enables the decoding/encoding of SAM, BAM and CRAM file formats.

SAM version 1.6 alignment optional fields data type

data SAM_V1_6_Alignment_HOPT

Custom SAM (version 1.6) SAM_V1_6_Alignment_HOPT data type.

See section 1.5 of the SAM v1.6 specification documentation.

Constructors

SAM_V1_6_Alignment_HOPT

Fields

• sam_v1_6_alignment_hopt_tag :: ByteString
• sam_v1_6_alignment_hopt_value :: ByteString

Instances

Generic SAM_V1_6_Alignment_HOPT

Defined in Data.SAM.Version1_6.Alignment.HOPT

Associated Types

type Rep SAM_V1_6_Alignment_HOPT :: Type -> Type

Methods

from :: SAM_V1_6_Alignment_HOPT -> Rep SAM_V1_6_Alignment_HOPT x

to :: Rep SAM_V1_6_Alignment_HOPT x -> SAM_V1_6_Alignment_HOPT

Show SAM_V1_6_Alignment_HOPT

Defined in Data.SAM.Version1_6.Alignment.HOPT

Methods

showsPrec :: Int -> SAM_V1_6_Alignment_HOPT -> ShowS

show :: SAM_V1_6_Alignment_HOPT -> String

showList :: [SAM_V1_6_Alignment_HOPT] -> ShowS

Eq SAM_V1_6_Alignment_HOPT

Defined in Data.SAM.Version1_6.Alignment.HOPT

Methods

(==) :: SAM_V1_6_Alignment_HOPT -> SAM_V1_6_Alignment_HOPT -> Bool

(/=) :: SAM_V1_6_Alignment_HOPT -> SAM_V1_6_Alignment_HOPT -> Bool

type Rep SAM_V1_6_Alignment_HOPT

Defined in Data.SAM.Version1_6.Alignment.HOPT

type Rep SAM_V1_6_Alignment_HOPT = D1 ('MetaData "SAM_V1_6_Alignment_HOPT" "Data.SAM.Version1_6.Alignment.HOPT" "hs-samtools-0.9.0.0-inplace" 'False) (C1 ('MetaCons "SAM_V1_6_Alignment_HOPT" 'PrefixI 'True) (S1 ('MetaSel ('Just "sam_v1_6_alignment_hopt_tag") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 ByteString) :*: S1 ('MetaSel ('Just "sam_v1_6_alignment_hopt_value") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 ByteString)))