korfu: The Korfu ORF Utility

[ bioinformatics, program ] [ Propose Tags ]

Reads nucleotide sequences in FASTA format, and generates predicted protein sequences, based on BLASTX hits. The predictions are constructed by merging information from multiple BLAST hits. Korfu can also also generate all (six-frame) translations (with the --all option)

Versions 0.1, 0.1.1, 0.2
Dependencies base, bio (>=0.3), bytestring, haskell98, simpleargs [details]
License LicenseRef-GPL
Author Ketil Malde
Maintainer Ketil Malde <ketil@malde.org>
Home page http://blog.malde.org/
Uploaded by KetilMalde at Fri Jan 30 20:02:52 UTC 2009
Distributions NixOS:0.2
Executables korfu
Downloads 1189 total (9 in the last 30 days)
Rating (no votes yet) [estimated by rule of succession]
Your Rating
  • λ
  • λ
  • λ
Status Docs not available [build log]
All reported builds failed as of 2017-01-02 [all 7 reports]
Hackage Matrix CI


Maintainer's Corner

For package maintainers and hackage trustees