The korfu package

[ Tags: bioinformatics, gpl, program ] [ Propose Tags ]

Reads nucleotide sequences in FASTA format, and generates predicted protein sequences, based on BLASTX hits. The predictions are constructed by merging information from multiple BLAST hits. Korfu can also also generate all (six-frame) translations (with the --all option)

Properties

Versions 0.1, 0.1.1, 0.2
Dependencies base, bio (>=0.3), bytestring, haskell98, simpleargs [details]
License GPL
Author Ketil Malde
Maintainer Ketil Malde <ketil@malde.org>
Home page http://blog.malde.org/
Uploaded Fri Jan 30 20:02:52 UTC 2009 by KetilMalde
Distributions NixOS:0.2
Executables korfu
Downloads 781 total (7 in the last 30 days)
Rating 0.0 (0 ratings) [clear rating]
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Status Docs not available [build log]
All reported builds failed as of 2017-01-02 [all 7 reports]
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