korfu: The Korfu ORF Utility

[ bioinformatics, program ] [ Propose Tags ]

Reads nucleotide sequences in FASTA format, and generates predicted protein sequences, based on BLASTX hits. The predictions are constructed by merging information from multiple BLAST hits. Korfu can also also generate all (six-frame) translations (with the --all option)

Versions 0.1, 0.1.1, 0.2
Dependencies base (>=3 && <5), bio (>=0.4), bytestring, haskell98, simpleargs [details]
License LicenseRef-GPL
Author Ketil Malde
Maintainer Ketil Malde <ketil@malde.org>
Category Bioinformatics
Home page http://blog.malde.org/
Uploaded by KetilMalde at Fri Sep 10 11:51:02 UTC 2010
Distributions NixOS:0.2
Executables korfu
Downloads 1246 total (13 in the last 30 days)
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Status Docs not available [build log]
All reported builds failed as of 2016-12-29 [all 8 reports]
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