The korfu package
Reads nucleotide sequences in FASTA format, and generates predicted protein sequences, based on BLASTX hits. The predictions are constructed by merging information from multiple BLAST hits. Korfu can also also generate all (six-frame) translations (with the --all option)
Properties
| Versions | 0.1, 0.1.1, 0.2 |
|---|---|
| Dependencies | base (≥3 & <5), bio (≥0.4), bytestring, haskell98, simpleargs |
| License | GPL |
| Author | Ketil Malde |
| Maintainer | Ketil Malde <ketil@malde.org> |
| Category | Bioinformatics |
| Home page | http://blog.malde.org/ |
| Executables | korfu |
| Upload date | Fri Sep 10 11:51:02 UTC 2010 |
| Uploaded by | KetilMalde |
Downloads
- korfu-0.2.tar.gz (Cabal source package)
- package description (included in the package)