The sgrep package

[ Tags: bioinformatics, gpl, program ] [ Propose Tags ]

This is a simple utility to extract sequences from Fasta files. It expects its first parameter to be a regular expression, and its second to be a Fasta-formatted file. It will then output all sequences matching the regexp to standard output.

Properties

Versions 0.0
Dependencies base (>=3 && <5), bio, regex-compat [details]
License GPL
Author Ketil Malde
Maintainer Ketil Malde <ketil@malde.org>
Category Bioinformatics
Home page http://blog.malde.org/
Uploaded Mon Sep 13 13:37:05 UTC 2010 by KetilMalde
Distributions NixOS:0.0
Executables sgrep
Downloads 354 total (2 in the last 30 days)
Rating 0.0 (0 ratings) [clear rating]
  • λ
  • λ
  • λ
Status Docs not available [build log]
Successful builds reported [all 7 reports]
Hackage Matrix CI

Downloads

Maintainer's Corner

For package maintainers and hackage trustees