Copyright	(c) Dominik Schrempf 2018
License	GPL-3.0-or-later
Maintainer	dominik.schrempf@gmail.com
Stability	unstable
Portability	portable
Safe Haskell	None
Language	Haskell2010

SLynx.Concatenate.Options

Description

Creation date: Sun Oct 7 17:29:45 2018.

Synopsis

data ConcatenateArguments = ConcatenateArguments {
- ccAlphabet :: Alphabet
- ccInFiles :: [FilePath]
}
concatenateArguments :: Parser ConcatenateArguments

Documentation

data ConcatenateArguments Source #

Arguments needed to concatenate multi sequence alignments.

Constructors

ConcatenateArguments
Fields ccAlphabet :: Alphabet ccInFiles :: [FilePath]

Instances

Eq ConcatenateArguments Source #
Instance details Defined in SLynx.Concatenate.Options Methods (==) :: ConcatenateArguments -> ConcatenateArguments -> Bool # (/=) :: ConcatenateArguments -> ConcatenateArguments -> Bool #
Show ConcatenateArguments Source #
Instance details Defined in SLynx.Concatenate.Options Methods showsPrec :: Int -> ConcatenateArguments -> ShowS # show :: ConcatenateArguments -> String # showList :: [ConcatenateArguments] -> ShowS #
Generic ConcatenateArguments Source #
Instance details Defined in SLynx.Concatenate.Options Associated Types type Rep ConcatenateArguments :: Type -> Type # Methods from :: ConcatenateArguments -> Rep ConcatenateArguments x # to :: Rep ConcatenateArguments x -> ConcatenateArguments #
ToJSON ConcatenateArguments Source #
Instance details Defined in SLynx.Concatenate.Options Methods toJSON :: ConcatenateArguments -> Value # toEncoding :: ConcatenateArguments -> Encoding # toJSONList :: [ConcatenateArguments] -> Value # toEncodingList :: [ConcatenateArguments] -> Encoding #
FromJSON ConcatenateArguments Source #
Instance details Defined in SLynx.Concatenate.Options Methods parseJSON :: Value -> Parser ConcatenateArguments # parseJSONList :: Value -> Parser [ConcatenateArguments] #
Reproducible ConcatenateArguments Source #
Instance details Defined in SLynx.Concatenate.Options Methods inFiles :: ConcatenateArguments -> [FilePath] # outSuffixes :: ConcatenateArguments -> [String] # getSeed :: ConcatenateArguments -> Maybe Seed # setSeed :: ConcatenateArguments -> Vector Word32 -> ConcatenateArguments # parser :: Parser ConcatenateArguments # cmdName :: String # cmdDsc :: [String] # cmdFtr :: [String] #
type Rep ConcatenateArguments Source #
Instance details Defined in SLynx.Concatenate.Options type Rep ConcatenateArguments = D1 (MetaData "ConcatenateArguments" "SLynx.Concatenate.Options" "slynx-0.3.4-4y5QPHfHmzqAh2cplyij9D" False) (C1 (MetaCons "ConcatenateArguments" PrefixI True) (S1 (MetaSel (Just "ccAlphabet") NoSourceUnpackedness NoSourceStrictness DecidedLazy) (Rec0 Alphabet) :*: S1 (MetaSel (Just "ccInFiles") NoSourceUnpackedness NoSourceStrictness DecidedLazy) (Rec0 [FilePath])))

concatenateArguments :: Parser ConcatenateArguments Source #

Command line parser.