slynx-0.6.1.0: Handle molecular sequences

Copyright	(c) Dominik Schrempf 2021
License	GPL-3.0-or-later
Maintainer	dominik.schrempf@gmail.com
Stability	unstable
Portability	portable
Safe Haskell	None
Language	Haskell2010

SLynx.Options

Description

Creation date: Sat Sep 7 18:55:03 2019.

Synopsis

data CommandArguments

Documentation

data CommandArguments Source #

The different SLynx commands and their arguments.

Constructors

Concatenate ConcatenateArguments
Examine ExamineArguments
FilterCols FilterColsArguments
FilterRows FilterRowsArguments
Simulate SimulateArguments
SubSample SubSampleArguments
Translate TranslateArguments

Instances

Instances details

Eq CommandArguments Source #
Instance details Defined in SLynx.Options Methods (==) :: CommandArguments -> CommandArguments -> Bool # (/=) :: CommandArguments -> CommandArguments -> Bool #
Show CommandArguments Source #
Instance details Defined in SLynx.Options Methods showsPrec :: Int -> CommandArguments -> ShowS # show :: CommandArguments -> String # showList :: [CommandArguments] -> ShowS #
Generic CommandArguments Source #
Instance details Defined in SLynx.Options Associated Types type Rep CommandArguments :: Type -> Type # Methods from :: CommandArguments -> Rep CommandArguments x # to :: Rep CommandArguments x -> CommandArguments #
ToJSON CommandArguments Source #
Instance details Defined in SLynx.Options Methods toJSON :: CommandArguments -> Value # toEncoding :: CommandArguments -> Encoding # toJSONList :: [CommandArguments] -> Value # toEncodingList :: [CommandArguments] -> Encoding #
FromJSON CommandArguments Source #
Instance details Defined in SLynx.Options Methods parseJSON :: Value -> Parser CommandArguments # parseJSONList :: Value -> Parser [CommandArguments] #
Reproducible CommandArguments Source #
Instance details Defined in SLynx.Options Methods inFiles :: CommandArguments -> [FilePath] # outSuffixes :: CommandArguments -> [String] # getSeed :: CommandArguments -> Maybe SeedOpt # setSeed :: CommandArguments -> SeedOpt -> CommandArguments # parser :: Parser CommandArguments # cmdName :: String # cmdDsc :: [String] # cmdFtr :: [String] #
type Rep CommandArguments Source #
Instance details Defined in SLynx.Options type Rep CommandArguments = D1 ('MetaData "CommandArguments" "SLynx.Options" "slynx-0.6.1.0-6DZs4WGzTYnIRsh1sbksxr" 'False) ((C1 ('MetaCons "Concatenate" 'PrefixI 'False) (S1 ('MetaSel ('Nothing :: Maybe Symbol) 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 ConcatenateArguments)) :+: (C1 ('MetaCons "Examine" 'PrefixI 'False) (S1 ('MetaSel ('Nothing :: Maybe Symbol) 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 ExamineArguments)) :+: C1 ('MetaCons "FilterCols" 'PrefixI 'False) (S1 ('MetaSel ('Nothing :: Maybe Symbol) 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 FilterColsArguments)))) :+: ((C1 ('MetaCons "FilterRows" 'PrefixI 'False) (S1 ('MetaSel ('Nothing :: Maybe Symbol) 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 FilterRowsArguments)) :+: C1 ('MetaCons "Simulate" 'PrefixI 'False) (S1 ('MetaSel ('Nothing :: Maybe Symbol) 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 SimulateArguments))) :+: (C1 ('MetaCons "SubSample" 'PrefixI 'False) (S1 ('MetaSel ('Nothing :: Maybe Symbol) 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 SubSampleArguments)) :+: C1 ('MetaCons "Translate" 'PrefixI 'False) (S1 ('MetaSel ('Nothing :: Maybe Symbol) 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 TranslateArguments)))))