xsact-1.6: Cluster EST sequences
Source code
Contents
Index
Cluster
Synopsis
type
Cluster
= (
Set
EST
, [
SMPair
])
cluster_single
::
Bool
-> [
EST
] ->
Int
-> [
SMPair
] -> [
Cluster
]
cluster_simple
::
Bool
-> [
EST
] ->
Int
-> [
SMPair
] -> [
Cluster
]
cluster_all
::
Bool
-> [
EST
] ->
Int
-> [
SMPair
] -> [
Cluster
]
labels
::
Cluster
->
String
newick
::
Cluster
->
String
unigene
::
Cluster
->
String
Documentation
type
Cluster
= (
Set
EST
, [
SMPair
])
Source
cluster_single
::
Bool
-> [
EST
] ->
Int
-> [
SMPair
] -> [
Cluster
]
Source
cluster_simple
::
Bool
-> [
EST
] ->
Int
-> [
SMPair
] -> [
Cluster
]
Source
cluster builds a single linkage transitive closure
cluster_all
::
Bool
-> [
EST
] ->
Int
-> [
SMPair
] -> [
Cluster
]
Source
labels
::
Cluster
->
String
Source
newick
::
Cluster
->
String
Source
unigene
::
Cluster
->
String
Source
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