Build #1 for Biobase-0.3.1.1

[all reports]

Package Biobase-0.3.1.1
Install BuildFailed
Docs NotTried
Tests NotTried
Time submitted unknown
Compiler ghc-7.6.3
OS linux
Arch x86_64
Dependencies zlib-0.5.4.1, vector-read-instances-0.0.2.0, vector-0.7.1, utility-ht-0.0.9, tuple-0.2.0.1, split-0.2.2, primitive-0.3.1, parsec-3.1.3, mtl-2.1.2, ghc-prim-0.3.0.0, filepath-1.3.0.1, filemanip-0.3.6.2, file-embed-0.0.6, either-unwrap-1.1, directory-1.2.0.1, deepseq-1.3.0.1, containers-0.5.0.0, bytestring-0.10.0.2, base-4.6.0.1, array-0.4.0.1, PrimitiveArray-0.0.3.1, ParsecTools-0.0.2.0, HsTools-0.0.1.1
Flags none

Code Coverage

No Code Coverage was submitted for this report.

Build log

[view raw]

Resolving dependencies...
Downloading HsTools-0.0.1.1...
Configuring HsTools-0.0.1.1...
Building HsTools-0.0.1.1...
Preprocessing library HsTools-0.0.1.1...
[1 of 3] Compiling Debug.Trace.Tools ( Debug/Trace/Tools.hs, dist/build/Debug/Trace/Tools.o )
[2 of 3] Compiling Data.Ix.List     ( Data/Ix/List.hs, dist/build/Data/Ix/List.o )
[3 of 3] Compiling Data.Ix.Tuple    ( Data/Ix/Tuple.hs, dist/build/Data/Ix/Tuple.o )
In-place registering HsTools-0.0.1.1...
Running Haddock for HsTools-0.0.1.1...
Running hscolour for HsTools-0.0.1.1...
Preprocessing library HsTools-0.0.1.1...
Preprocessing library HsTools-0.0.1.1...
Warning: The documentation for the following packages are not installed. No
links will be generated to these packages: rts-1.0
Haddock coverage:
  75% (  3 /  4) in 'Debug.Trace.Tools'
 100% (  4 /  4) in 'Data.Ix.List'
   0% (  0 /  1) in 'Data.Ix.Tuple'
Documentation created: dist/doc/html/HsTools/index.html
Installing library in
/srv/hackage/var/build/tmp-install/lib/HsTools-0.0.1.1/ghc-7.6.3
Registering HsTools-0.0.1.1...
Installed HsTools-0.0.1.1
Downloading OneTuple-0.2.1...
Configuring OneTuple-0.2.1...
Building OneTuple-0.2.1...
Preprocessing library OneTuple-0.2.1...
[1 of 1] Compiling Data.Tuple.OneTuple ( Data/Tuple/OneTuple.hs, dist/build/Data/Tuple/OneTuple.o )
In-place registering OneTuple-0.2.1...
Running Haddock for OneTuple-0.2.1...
Running hscolour for OneTuple-0.2.1...
Preprocessing library OneTuple-0.2.1...
Preprocessing library OneTuple-0.2.1...
Warning: The documentation for the following packages are not installed. No
links will be generated to these packages: rts-1.0
Haddock coverage:
 100% (  3 /  3) in 'Data.Tuple.OneTuple'
Documentation created: dist/doc/html/OneTuple/index.html
Installing library in
/srv/hackage/var/build/tmp-install/lib/OneTuple-0.2.1/ghc-7.6.3
Registering OneTuple-0.2.1...
Installed OneTuple-0.2.1
Downloading ParsecTools-0.0.2.0...
Configuring ParsecTools-0.0.2.0...
Building ParsecTools-0.0.2.0...
Preprocessing library ParsecTools-0.0.2.0...
[1 of 1] Compiling Text.Parsec.Numbers ( Text/Parsec/Numbers.hs, dist/build/Text/Parsec/Numbers.o )
In-place registering ParsecTools-0.0.2.0...
Running Haddock for ParsecTools-0.0.2.0...
Running hscolour for ParsecTools-0.0.2.0...
Preprocessing library ParsecTools-0.0.2.0...
Preprocessing library ParsecTools-0.0.2.0...
Warning: The documentation for the following packages are not installed. No
links will be generated to these packages: rts-1.0, mtl-2.1.2, parsec-3.1.3,
text-0.11.2.3, transformers-0.3.0.0
Haddock coverage:
 100% (  5 /  5) in 'Text.Parsec.Numbers'
Warning: Text.Parsec.Numbers: could not find link destinations for:
    Text.Parsec.String.GenParser
Documentation created: dist/doc/html/ParsecTools/index.html
Installing library in
/srv/hackage/var/build/tmp-install/lib/ParsecTools-0.0.2.0/ghc-7.6.3
Registering ParsecTools-0.0.2.0...
Installed ParsecTools-0.0.2.0
Downloading either-unwrap-1.1...
Configuring either-unwrap-1.1...
Building either-unwrap-1.1...
Preprocessing library either-unwrap-1.1...
[1 of 1] Compiling Data.Either.Unwrap ( Data/Either/Unwrap.hs, dist/build/Data/Either/Unwrap.o )
In-place registering either-unwrap-1.1...
Running Haddock for either-unwrap-1.1...
Running hscolour for either-unwrap-1.1...
Preprocessing library either-unwrap-1.1...
Preprocessing library either-unwrap-1.1...
Warning: The documentation for the following packages are not installed. No
links will be generated to these packages: rts-1.0
Haddock coverage:
 100% ( 13 / 13) in 'Data.Either.Unwrap'
Documentation created: dist/doc/html/either-unwrap/index.html
Installing library in
/srv/hackage/var/build/tmp-install/lib/either-unwrap-1.1/ghc-7.6.3
Registering either-unwrap-1.1...
Installed either-unwrap-1.1
Downloading file-embed-0.0.6...
Configuring file-embed-0.0.6...
Building file-embed-0.0.6...
Preprocessing library file-embed-0.0.6...
[1 of 1] Compiling Data.FileEmbed   ( Data/FileEmbed.hs, dist/build/Data/FileEmbed.o )
In-place registering file-embed-0.0.6...
Running Haddock for file-embed-0.0.6...
Running hscolour for file-embed-0.0.6...
Preprocessing library file-embed-0.0.6...
Preprocessing library file-embed-0.0.6...
Warning: The documentation for the following packages are not installed. No
links will be generated to these packages: rts-1.0
Haddock coverage:
  67% (  8 / 12) in 'Data.FileEmbed'
Documentation created: dist/doc/html/file-embed/index.html
Installing library in
/srv/hackage/var/build/tmp-install/lib/file-embed-0.0.6/ghc-7.6.3
Registering file-embed-0.0.6...
Installed file-embed-0.0.6
Downloading primitive-0.3.1...
Configuring primitive-0.3.1...
Building primitive-0.3.1...
Preprocessing library primitive-0.3.1...
[1 of 7] Compiling Data.Primitive.MachDeps ( Data/Primitive/MachDeps.hs, dist/build/Data/Primitive/MachDeps.o )
[2 of 7] Compiling Control.Monad.Primitive ( Control/Monad/Primitive.hs, dist/build/Control/Monad/Primitive.o )

Control/Monad/Primitive.hs:24:1: Warning:
    Module `GHC.IOBase' is deprecated: use GHC.IO instead
[3 of 7] Compiling Data.Primitive.Types ( Data/Primitive/Types.hs, dist/build/Data/Primitive/Types.o )

Data/Primitive/Types.hs:57:18: Warning:
    In the use of `mkNorepType' (imported from Data.Data):
    Deprecated: "Use mkNoRepType instead"
[4 of 7] Compiling Data.Primitive.Array ( Data/Primitive/Array.hs, dist/build/Data/Primitive/Array.o )

Data/Primitive/Array.hs:112:18: Warning:
    In the use of `mkNorepType' (imported from Data.Data):
    Deprecated: "Use mkNoRepType instead"

Data/Primitive/Array.hs:117:18: Warning:
    In the use of `mkNorepType' (imported from Data.Data):
    Deprecated: "Use mkNoRepType instead"
[5 of 7] Compiling Data.Primitive.ByteArray ( Data/Primitive/ByteArray.hs, dist/build/Data/Primitive/ByteArray.o )

Data/Primitive/ByteArray.hs:203:18: Warning:
    In the use of `mkNorepType' (imported from Data.Data):
    Deprecated: "Use mkNoRepType instead"

Data/Primitive/ByteArray.hs:208:18: Warning:
    In the use of `mkNorepType' (imported from Data.Data):
    Deprecated: "Use mkNoRepType instead"
[6 of 7] Compiling Data.Primitive.Addr ( Data/Primitive/Addr.hs, dist/build/Data/Primitive/Addr.o )
[7 of 7] Compiling Data.Primitive   ( Data/Primitive.hs, dist/build/Data/Primitive.o )
In-place registering primitive-0.3.1...
Running Haddock for primitive-0.3.1...
Running hscolour for primitive-0.3.1...
Preprocessing library primitive-0.3.1...
Preprocessing library primitive-0.3.1...
Warning: The documentation for the following packages are not installed. No
links will be generated to these packages: rts-1.0

dist/build/tmp-5551/Control/Monad/Primitive.hs:24:1: Warning:
    Module `GHC.IOBase' is deprecated: use GHC.IO instead

dist/build/tmp-5551/Data/Primitive/Types.hs:57:18: Warning:
    In the use of `mkNorepType' (imported from Data.Data):
    Deprecated: "Use mkNoRepType instead"

dist/build/tmp-5551/Data/Primitive/Array.hs:112:18: Warning:
    In the use of `mkNorepType' (imported from Data.Data):
    Deprecated: "Use mkNoRepType instead"

dist/build/tmp-5551/Data/Primitive/Array.hs:117:18: Warning:
    In the use of `mkNorepType' (imported from Data.Data):
    Deprecated: "Use mkNoRepType instead"

dist/build/tmp-5551/Data/Primitive/ByteArray.hs:203:18: Warning:
    In the use of `mkNorepType' (imported from Data.Data):
    Deprecated: "Use mkNoRepType instead"

dist/build/tmp-5551/Data/Primitive/ByteArray.hs:208:18: Warning:
    In the use of `mkNorepType' (imported from Data.Data):
    Deprecated: "Use mkNoRepType instead"
Haddock coverage:
   3% (  1 / 33) in 'Data.Primitive.MachDeps'
Warning: Control.Monad.Primitive: We do not support associated types in instances yet. These instances are affected:
Control.Monad.Primitive.PrimMonad GHC.Types.IO, Control.Monad.Primitive.PrimMonad (GHC.ST.ST s)
  71% ( 10 / 14) in 'Control.Monad.Primitive'
 100% (  3 /  3) in 'Data.Primitive.Types'
 100% ( 11 / 11) in 'Data.Primitive.Array'
  73% ( 16 / 22) in 'Data.Primitive.ByteArray'
  80% (  8 / 10) in 'Data.Primitive.Addr'
 100% (  7 /  7) in 'Data.Primitive'
Documentation created: dist/doc/html/primitive/index.html
Installing library in
/srv/hackage/var/build/tmp-install/lib/primitive-0.3.1/ghc-7.6.3
Registering primitive-0.3.1...
Installed primitive-0.3.1
Downloading split-0.2.2...
Configuring split-0.2.2...
Building split-0.2.2...
Preprocessing library split-0.2.2...
[1 of 2] Compiling Data.List.Split.Internals ( src/Data/List/Split/Internals.hs, dist/build/Data/List/Split/Internals.o )
[2 of 2] Compiling Data.List.Split  ( src/Data/List/Split.hs, dist/build/Data/List/Split.o )
In-place registering split-0.2.2...
Running Haddock for split-0.2.2...
Running hscolour for split-0.2.2...
Preprocessing library split-0.2.2...
Preprocessing library split-0.2.2...
Warning: The documentation for the following packages are not installed. No
links will be generated to these packages: rts-1.0
Haddock coverage:
  91% ( 61 / 67) in 'Data.List.Split.Internals'
  90% ( 44 / 49) in 'Data.List.Split'
Documentation created: dist/doc/html/split/index.html
Installing library in
/srv/hackage/var/build/tmp-install/lib/split-0.2.2/ghc-7.6.3
Registering split-0.2.2...
Installed split-0.2.2
Downloading unix-compat-0.4.1.1...
Configuring unix-compat-0.4.1.1...
Building unix-compat-0.4.1.1...
Preprocessing library unix-compat-0.4.1.1...
[1 of 8] Compiling System.PosixCompat.User ( dist/build/System/PosixCompat/User.hs, dist/build/System/PosixCompat/User.o )
[2 of 8] Compiling System.PosixCompat.Unistd ( src/System/PosixCompat/Unistd.hs, dist/build/System/PosixCompat/Unistd.o )
[3 of 8] Compiling System.PosixCompat.Types ( src/System/PosixCompat/Types.hs, dist/build/System/PosixCompat/Types.o )
[4 of 8] Compiling System.PosixCompat.Extensions ( dist/build/System/PosixCompat/Extensions.hs, dist/build/System/PosixCompat/Extensions.o )
[5 of 8] Compiling System.PosixCompat.Time ( src/System/PosixCompat/Time.hs, dist/build/System/PosixCompat/Time.o )
[6 of 8] Compiling System.PosixCompat.Temp ( src/System/PosixCompat/Temp.hs, dist/build/System/PosixCompat/Temp.o )
[7 of 8] Compiling System.PosixCompat.Files ( dist/build/System/PosixCompat/Files.hs, dist/build/System/PosixCompat/Files.o )
[8 of 8] Compiling System.PosixCompat ( src/System/PosixCompat.hs, dist/build/System/PosixCompat.o )
In-place registering unix-compat-0.4.1.1...
Running Haddock for unix-compat-0.4.1.1...
Running hscolour for unix-compat-0.4.1.1...
Preprocessing library unix-compat-0.4.1.1...
Preprocessing library unix-compat-0.4.1.1...
Warning: The documentation for the following packages are not installed. No
links will be generated to these packages: rts-1.0
Haddock coverage:
  91% ( 21 / 23) in 'System.PosixCompat.User'
  75% (  6 /  8) in 'System.PosixCompat.Unistd'
 100% (  2 /  2) in 'System.PosixCompat.Types'
  71% (  5 /  7) in 'System.PosixCompat.Extensions'
 100% (  2 /  2) in 'System.PosixCompat.Time'
 100% (  2 /  2) in 'System.PosixCompat.Temp'
  99% ( 77 / 78) in 'System.PosixCompat.Files'
 100% (  8 /  8) in 'System.PosixCompat'
Documentation created: dist/doc/html/unix-compat/index.html
Installing library in
/srv/hackage/var/build/tmp-install/lib/unix-compat-0.4.1.1/ghc-7.6.3
Registering unix-compat-0.4.1.1...
Installed unix-compat-0.4.1.1
Downloading utility-ht-0.0.9...
Configuring utility-ht-0.0.9...
Building utility-ht-0.0.9...
Preprocessing library utility-ht-0.0.9...
[ 1 of 24] Compiling Text.Show.HT     ( src/Text/Show/HT.hs, dist/build/Text/Show/HT.o )
[ 2 of 24] Compiling Text.Read.HT     ( src/Text/Read/HT.hs, dist/build/Text/Read/HT.o )
[ 3 of 24] Compiling Data.Strictness.HT ( src/Data/Strictness/HT.hs, dist/build/Data/Strictness/HT.o )
[ 4 of 24] Compiling Control.Functor.HT ( src/Control/Functor/HT.hs, dist/build/Control/Functor/HT.o )
[ 5 of 24] Compiling Control.Monad.HT ( src/Control/Monad/HT.hs, dist/build/Control/Monad/HT.o )
[ 6 of 24] Compiling Data.Tuple.HT    ( src/Data/Tuple/HT.hs, dist/build/Data/Tuple/HT.o )
[ 7 of 24] Compiling Data.Monoid.HT   ( src/Data/Monoid/HT.hs, dist/build/Data/Monoid/HT.o )
[ 8 of 24] Compiling Data.Maybe.HT    ( src/Data/Maybe/HT.hs, dist/build/Data/Maybe/HT.o )
[ 9 of 24] Compiling Data.Ix.Enum     ( src/Data/Ix/Enum.hs, dist/build/Data/Ix/Enum.o )
[10 of 24] Compiling Data.Function.HT.Private ( src/Data/Function/HT/Private.hs, dist/build/Data/Function/HT/Private.o )
[11 of 24] Compiling Data.Function.HT ( src/Data/Function/HT.hs, dist/build/Data/Function/HT.o )
[12 of 24] Compiling Data.List.Key.Private ( src/Data/List/Key/Private.hs, dist/build/Data/List/Key/Private.o )
[13 of 24] Compiling Data.List.Key    ( src/Data/List/Key.hs, dist/build/Data/List/Key.o )
[14 of 24] Compiling Data.Ord.HT      ( src/Data/Ord/HT.hs, dist/build/Data/Ord/HT.o )
[15 of 24] Compiling Data.Eq.HT       ( src/Data/Eq/HT.hs, dist/build/Data/Eq/HT.o )
[16 of 24] Compiling Data.Bool.HT.Private ( src/Data/Bool/HT/Private.hs, dist/build/Data/Bool/HT/Private.o )
[17 of 24] Compiling Data.Bool.HT     ( src/Data/Bool/HT.hs, dist/build/Data/Bool/HT.o )
[18 of 24] Compiling Data.List.Match.Private ( src/Data/List/Match/Private.hs, dist/build/Data/List/Match/Private.o )
[19 of 24] Compiling Data.List.HT.Private ( src/Data/List/HT/Private.hs, dist/build/Data/List/HT/Private.o )
[20 of 24] Compiling Data.List.HT     ( src/Data/List/HT.hs, dist/build/Data/List/HT.o )
[21 of 24] Compiling Data.Record.HT.Private ( src/Data/Record/HT/Private.hs, dist/build/Data/Record/HT/Private.o )
[22 of 24] Compiling Data.Record.HT   ( src/Data/Record/HT.hs, dist/build/Data/Record/HT.o )
[23 of 24] Compiling Data.String.HT   ( src/Data/String/HT.hs, dist/build/Data/String/HT.o )
[24 of 24] Compiling Data.List.Match  ( src/Data/List/Match.hs, dist/build/Data/List/Match.o )
In-place registering utility-ht-0.0.9...
Running Haddock for utility-ht-0.0.9...
Running hscolour for utility-ht-0.0.9...
Preprocessing library utility-ht-0.0.9...
Preprocessing library utility-ht-0.0.9...
Warning: The documentation for the following packages are not installed. No
links will be generated to these packages: rts-1.0
Haddock coverage:
  33% (  1 /  3) in 'Text.Show.HT'
  40% (  2 /  5) in 'Text.Read.HT'
   0% (  0 /  6) in 'Data.Strictness.HT'
   0% (  0 /  2) in 'Control.Functor.HT'
  80% (  8 / 10) in 'Control.Monad.HT'
  29% (  5 / 17) in 'Data.Tuple.HT'
  67% (  2 /  3) in 'Data.Monoid.HT'
  50% (  2 /  4) in 'Data.Maybe.HT'
  14% (  1 /  7) in 'Data.Ix.Enum'
  75% (  6 /  8) in 'Data.Function.HT.Private'
  75% (  3 /  4) in 'Data.Function.HT'
  29% (  5 / 17) in 'Data.List.Key.Private'
  57% (  4 /  7) in 'Data.List.Key'
  50% (  2 /  4) in 'Data.Ord.HT'
   0% (  0 /  2) in 'Data.Eq.HT'
  78% (  7 /  9) in 'Data.Bool.HT.Private'
  83% (  5 /  6) in 'Data.Bool.HT'
  56% ( 10 / 18) in 'Data.List.Match.Private'
  46% ( 56 /121) in 'Data.List.HT.Private'
  73% ( 41 / 56) in 'Data.List.HT'
  40% (  2 /  5) in 'Data.Record.HT.Private'
  67% (  2 /  3) in 'Data.Record.HT'
  50% (  1 /  2) in 'Data.String.HT'
  67% (  6 /  9) in 'Data.List.Match'
Documentation created: dist/doc/html/utility-ht/index.html
Installing library in
/srv/hackage/var/build/tmp-install/lib/utility-ht-0.0.9/ghc-7.6.3
Registering utility-ht-0.0.9...
Installed utility-ht-0.0.9
Downloading tuple-0.2.0.1...
Configuring tuple-0.2.0.1...
Building tuple-0.2.0.1...
Preprocessing library tuple-0.2.0.1...
[1 of 5] Compiling Data.Tuple.Update ( src/Data/Tuple/Update.hs, dist/build/Data/Tuple/Update.o )
[2 of 5] Compiling Data.Tuple.Sequence ( src/Data/Tuple/Sequence.hs, dist/build/Data/Tuple/Sequence.o )
[3 of 5] Compiling Data.Tuple.Select ( src/Data/Tuple/Select.hs, dist/build/Data/Tuple/Select.o )
[4 of 5] Compiling Data.Tuple.Curry ( src/Data/Tuple/Curry.hs, dist/build/Data/Tuple/Curry.o )
[5 of 5] Compiling Data.Tuple.All   ( src/Data/Tuple/All.hs, dist/build/Data/Tuple/All.o )
In-place registering tuple-0.2.0.1...
Running Haddock for tuple-0.2.0.1...
Running hscolour for tuple-0.2.0.1...
Preprocessing library tuple-0.2.0.1...
Preprocessing library tuple-0.2.0.1...
Warning: The documentation for the following packages are not installed. No
links will be generated to these packages: rts-1.0
Haddock coverage:
   0% (  0 / 16) in 'Data.Tuple.Update'
  50% (  1 /  2) in 'Data.Tuple.Sequence'
   0% (  0 / 16) in 'Data.Tuple.Select'
  50% (  1 /  2) in 'Data.Tuple.Curry'
  83% (  5 /  6) in 'Data.Tuple.All'
Documentation created: dist/doc/html/tuple/index.html
Installing library in
/srv/hackage/var/build/tmp-install/lib/tuple-0.2.0.1/ghc-7.6.3
Registering tuple-0.2.0.1...
Installed tuple-0.2.0.1
Downloading PrimitiveArray-0.0.3.1...
Configuring PrimitiveArray-0.0.3.1...
Building PrimitiveArray-0.0.3.1...
Preprocessing library PrimitiveArray-0.0.3.1...
[1 of 3] Compiling Data.PrimitiveArray.Internal ( Data/PrimitiveArray/Internal.hs, dist/build/Data/PrimitiveArray/Internal.o )
[2 of 3] Compiling Data.PrimitiveArray ( Data/PrimitiveArray.hs, dist/build/Data/PrimitiveArray.o )
[3 of 3] Compiling Data.PrimitiveArray.Ix ( Data/PrimitiveArray/Ix.hs, dist/build/Data/PrimitiveArray/Ix.o )

Data/PrimitiveArray/Ix.hs:27:24: Warning:
    Ignoring unusable UNPACK pragma on the first argument of `PaIxP'
    In the definition of data constructor `PaIxP'
    In the data instance declaration for `PrimArray'
    In the instance declaration for `PrimArrayOps a b'

Data/PrimitiveArray/Ix.hs:27:24: Warning:
    Ignoring unusable UNPACK pragma on the second argument of `PaIxP'
    In the definition of data constructor `PaIxP'
    In the data instance declaration for `PrimArray'
    In the instance declaration for `PrimArrayOps a b'

Data/PrimitiveArray/Ix.hs:48:32: Warning:
    Ignoring unusable UNPACK pragma on the first argument of `PaIxPM'
    In the definition of data constructor `PaIxPM'
    In the data instance declaration for `PrimArrayM'
    In the instance declaration for `PrimArrayOpsM a b (ST s)'

Data/PrimitiveArray/Ix.hs:48:32: Warning:
    Ignoring unusable UNPACK pragma on the second argument of `PaIxPM'
    In the definition of data constructor `PaIxPM'
    In the data instance declaration for `PrimArrayM'
    In the instance declaration for `PrimArrayOpsM a b (ST s)'
In-place registering PrimitiveArray-0.0.3.1...
Running Haddock for PrimitiveArray-0.0.3.1...
Running hscolour for PrimitiveArray-0.0.3.1...
Preprocessing library PrimitiveArray-0.0.3.1...
Preprocessing library PrimitiveArray-0.0.3.1...
Warning: The documentation for the following packages are not installed. No
links will be generated to these packages: rts-1.0

dist/build/tmp-5551/Data/PrimitiveArray/Ix.hs:27:24: Warning:
    Ignoring unusable UNPACK pragma on the first argument of `PaIxP'
    In the definition of data constructor `PaIxP'
    In the data instance declaration for `PrimArray'
    In the instance declaration for `PrimArrayOps a b'

dist/build/tmp-5551/Data/PrimitiveArray/Ix.hs:27:24: Warning:
    Ignoring unusable UNPACK pragma on the second argument of `PaIxP'
    In the definition of data constructor `PaIxP'
    In the data instance declaration for `PrimArray'
    In the instance declaration for `PrimArrayOps a b'

dist/build/tmp-5551/Data/PrimitiveArray/Ix.hs:48:32: Warning:
    Ignoring unusable UNPACK pragma on the first argument of `PaIxPM'
    In the definition of data constructor `PaIxPM'
    In the data instance declaration for `PrimArrayM'
    In the instance declaration for `PrimArrayOpsM a b (ST s)'

dist/build/tmp-5551/Data/PrimitiveArray/Ix.hs:48:32: Warning:
    Ignoring unusable UNPACK pragma on the second argument of `PaIxPM'
    In the definition of data constructor `PaIxPM'
    In the data instance declaration for `PrimArrayM'
    In the instance declaration for `PrimArrayOpsM a b (ST s)'
Haddock coverage:
 100% (  3 /  3) in 'Data.PrimitiveArray.Internal'
  75% (  6 /  8) in 'Data.PrimitiveArray'
Warning: Data.PrimitiveArray.Ix: We do not support associated types in instances yet. These instances are affected:
(GHC.Enum.Bounded a, GHC.Arr.Ix a, Data.Primitive.Types.Prim b) =>
Data.PrimitiveArray.PrimArrayOps a b, (GHC.Enum.Bounded a, GHC.Arr.Ix a, Data.Primitive.Types.Prim b) =>
Data.PrimitiveArray.PrimArrayOpsM a b (GHC.ST.ST s)
 100% (  1 /  1) in 'Data.PrimitiveArray.Ix'
Documentation created: dist/doc/html/PrimitiveArray/index.html
Installing library in
/srv/hackage/var/build/tmp-install/lib/PrimitiveArray-0.0.3.1/ghc-7.6.3
Registering PrimitiveArray-0.0.3.1...
Installed PrimitiveArray-0.0.3.1
Downloading vector-0.7.1...
Configuring vector-0.7.1...
Building vector-0.7.1...
Preprocessing library vector-0.7.1...
[ 1 of 19] Compiling Data.Vector.Storable.Internal ( Data/Vector/Storable/Internal.hs, dist/build/Data/Vector/Storable/Internal.o )
[ 2 of 19] Compiling Data.Vector.Fusion.Util ( Data/Vector/Fusion/Util.hs, dist/build/Data/Vector/Fusion/Util.o )
[ 3 of 19] Compiling Data.Vector.Fusion.Stream.Size ( Data/Vector/Fusion/Stream/Size.hs, dist/build/Data/Vector/Fusion/Stream/Size.o )

Data/Vector/Fusion/Stream/Size.hs:25:10: Warning:
    No explicit method or default declaration for `*'
    In the instance declaration for `Num Size'

Data/Vector/Fusion/Stream/Size.hs:25:10: Warning:
    No explicit method or default declaration for `abs'
    In the instance declaration for `Num Size'

Data/Vector/Fusion/Stream/Size.hs:25:10: Warning:
    No explicit method or default declaration for `signum'
    In the instance declaration for `Num Size'
[ 4 of 19] Compiling Data.Vector.Internal.Check ( Data/Vector/Internal/Check.hs, dist/build/Data/Vector/Internal/Check.o )
[ 5 of 19] Compiling Data.Vector.Fusion.Stream.Monadic ( Data/Vector/Fusion/Stream/Monadic.hs, dist/build/Data/Vector/Fusion/Stream/Monadic.o )
Loading package ghc-prim ... linking ... done.
Loading package integer-gmp ... linking ... done.
Loading package base ... linking ... done.
Loading package primitive-0.3.1 ... linking ... done.
[ 6 of 19] Compiling Data.Vector.Fusion.Stream ( Data/Vector/Fusion/Stream.hs, dist/build/Data/Vector/Fusion/Stream.o )
[ 7 of 19] Compiling Data.Vector.Generic.Mutable ( Data/Vector/Generic/Mutable.hs, dist/build/Data/Vector/Generic/Mutable.o )
[ 8 of 19] Compiling Data.Vector.Generic.Base ( Data/Vector/Generic/Base.hs, dist/build/Data/Vector/Generic/Base.o )
[ 9 of 19] Compiling Data.Vector.Generic.New ( Data/Vector/Generic/New.hs, dist/build/Data/Vector/Generic/New.o )
[10 of 19] Compiling Data.Vector.Generic ( Data/Vector/Generic.hs, dist/build/Data/Vector/Generic.o )
[11 of 19] Compiling Data.Vector.Primitive.Mutable ( Data/Vector/Primitive/Mutable.hs, dist/build/Data/Vector/Primitive/Mutable.o )
[12 of 19] Compiling Data.Vector.Primitive ( Data/Vector/Primitive.hs, dist/build/Data/Vector/Primitive.o )
[13 of 19] Compiling Data.Vector.Storable.Mutable ( Data/Vector/Storable/Mutable.hs, dist/build/Data/Vector/Storable/Mutable.o )
[14 of 19] Compiling Data.Vector.Storable ( Data/Vector/Storable.hs, dist/build/Data/Vector/Storable.o )
[15 of 19] Compiling Data.Vector.Unboxed.Base ( Data/Vector/Unboxed/Base.hs, dist/build/Data/Vector/Unboxed/Base.o )

Data/Vector/Unboxed/Base.hs:55:27: Warning:
    In the use of `mkTyCon' (imported from Data.Typeable):
    Deprecated: "either derive Typeable, or use mkTyCon3 instead"

Data/Vector/Unboxed/Base.hs:58:27: Warning:
    In the use of `mkTyCon' (imported from Data.Typeable):
    Deprecated: "either derive Typeable, or use mkTyCon3 instead"
[16 of 19] Compiling Data.Vector.Unboxed ( Data/Vector/Unboxed.hs, dist/build/Data/Vector/Unboxed.o )
[17 of 19] Compiling Data.Vector.Unboxed.Mutable ( Data/Vector/Unboxed/Mutable.hs, dist/build/Data/Vector/Unboxed/Mutable.o )
[18 of 19] Compiling Data.Vector.Mutable ( Data/Vector/Mutable.hs, dist/build/Data/Vector/Mutable.o )
[19 of 19] Compiling Data.Vector      ( Data/Vector.hs, dist/build/Data/Vector.o )
In-place registering vector-0.7.1...
Running Haddock for vector-0.7.1...
Running hscolour for vector-0.7.1...
Preprocessing library vector-0.7.1...
Preprocessing library vector-0.7.1...
Warning: The documentation for the following packages are not installed. No
links will be generated to these packages: rts-1.0

Data/Vector/Fusion/Stream/Size.hs:25:10: Warning:
    No explicit method or default declaration for `*'
    In the instance declaration for `Num Size'

Data/Vector/Fusion/Stream/Size.hs:25:10: Warning:
    No explicit method or default declaration for `abs'
    In the instance declaration for `Num Size'

Data/Vector/Fusion/Stream/Size.hs:25:10: Warning:
    No explicit method or default declaration for `signum'
    In the instance declaration for `Num Size'

Data/Vector/Unboxed/Base.hs:55:27: Warning:
    In the use of `mkTyCon' (imported from Data.Typeable):
    Deprecated: "either derive Typeable, or use mkTyCon3 instead"

Data/Vector/Unboxed/Base.hs:58:27: Warning:
    In the use of `mkTyCon' (imported from Data.Typeable):
    Deprecated: "either derive Typeable, or use mkTyCon3 instead"
Haddock coverage:
  33% (  1 /  3) in 'Data.Vector.Storable.Internal'
 100% (  5 /  5) in 'Data.Vector.Fusion.Util'
 100% (  6 /  6) in 'Data.Vector.Fusion.Stream.Size'
  10% (  1 / 10) in 'Data.Vector.Internal.Check'
  83% (103 /124) in 'Data.Vector.Fusion.Stream.Monadic'
  84% ( 87 /103) in 'Data.Vector.Fusion.Stream'
  67% ( 45 / 67) in 'Data.Vector.Generic.Mutable'
 100% (  3 /  3) in 'Data.Vector.Generic.Base'
   5% (  1 / 19) in 'Data.Vector.Generic.New'
  93% (210 /227) in 'Data.Vector.Generic'
  77% ( 41 / 53) in 'Data.Vector.Primitive.Mutable'
Warning: Data.Vector.Primitive: Instances of type and data families are not yet supported. Instances of the following families will be filtered out:
  Mutable
  97% (183 /189) in 'Data.Vector.Primitive'
  80% ( 47 / 59) in 'Data.Vector.Storable.Mutable'
Warning: Data.Vector.Storable: Instances of type and data families are not yet supported. Instances of the following families will be filtered out:
  Mutable
  97% (190 /196) in 'Data.Vector.Storable'
Warning: Data.Vector.Unboxed.Base: Instances of type and data families are not yet supported. Instances of the following families will be filtered out:
  Mutable, MVector, Vector
  17% (  1 /  6) in 'Data.Vector.Unboxed.Base'
  96% (199 /208) in 'Data.Vector.Unboxed'
  78% ( 50 / 64) in 'Data.Vector.Unboxed.Mutable'
  77% ( 40 / 52) in 'Data.Vector.Mutable'
Warning: Data.Vector: Instances of type and data families are not yet supported. Instances of the following families will be filtered out:
  Mutable
  94% (197 /210) in 'Data.Vector'
Documentation created: dist/doc/html/vector/index.html
Installing library in
/srv/hackage/var/build/tmp-install/lib/vector-0.7.1/ghc-7.6.3
Registering vector-0.7.1...
Installed vector-0.7.1
Downloading filemanip-0.3.6.2...
Configuring filemanip-0.3.6.2...
Building filemanip-0.3.6.2...
Preprocessing library filemanip-0.3.6.2...
[1 of 4] Compiling System.FilePath.Manip ( System/FilePath/Manip.hs, dist/build/System/FilePath/Manip.o )
[2 of 4] Compiling System.FilePath.GlobPattern ( System/FilePath/GlobPattern.hs, dist/build/System/FilePath/GlobPattern.o )

System/FilePath/GlobPattern.hs:149:22: Warning:
    This binding for `g' shadows the existing binding
      bound at System/FilePath/GlobPattern.hs:148:24
[3 of 4] Compiling System.FilePath.Glob ( System/FilePath/Glob.hs, dist/build/System/FilePath/Glob.o )
[4 of 4] Compiling System.FilePath.Find ( System/FilePath/Find.hs, dist/build/System/FilePath/Find.o )

System/FilePath/Find.hs:220:20: Warning:
    This binding for `depth' shadows the existing binding
      defined at System/FilePath/Find.hs:188:1

System/FilePath/Find.hs:224:22: Warning:
    This binding for `depth' shadows the existing binding
      defined at System/FilePath/Find.hs:188:1

System/FilePath/Find.hs:231:25: Warning:
    This binding for `depth' shadows the existing binding
      defined at System/FilePath/Find.hs:188:1

System/FilePath/Find.hs:267:15: Warning:
    This binding for `state' shadows the existing binding
      bound at System/FilePath/Find.hs:264:38

System/FilePath/Find.hs:267:21: Warning:
    This binding for `path' shadows the existing binding
      bound at System/FilePath/Find.hs:264:44

System/FilePath/Find.hs:267:26: Warning:
    This binding for `depth' shadows the existing binding
      defined at System/FilePath/Find.hs:188:1

System/FilePath/Find.hs:272:18: Warning:
    This binding for `state' shadows the existing binding
      bound at System/FilePath/Find.hs:264:38

System/FilePath/Find.hs:272:28: Warning:
    This binding for `depth' shadows the existing binding
      defined at System/FilePath/Find.hs:188:1

System/FilePath/Find.hs:275:53: Warning:
    This binding for `state' shadows the existing binding
      bound at System/FilePath/Find.hs:272:18

System/FilePath/Find.hs:277:25: Warning:
    This binding for `path' shadows the existing binding
      bound at System/FilePath/Find.hs:264:44
In-place registering filemanip-0.3.6.2...
Running Haddock for filemanip-0.3.6.2...
Running hscolour for filemanip-0.3.6.2...
Preprocessing library filemanip-0.3.6.2...
Preprocessing library filemanip-0.3.6.2...
Warning: The documentation for the following packages are not installed. No
links will be generated to these packages: rts-1.0, mtl-2.1.2,
transformers-0.3.0.0

dist/build/tmp-5551/System/FilePath/GlobPattern.hs:149:22: Warning:
    This binding for `g' shadows the existing binding
      bound at dist/build/tmp-5551/System/FilePath/GlobPattern.hs:148:24

dist/build/tmp-5551/System/FilePath/Find.hs:220:20: Warning:
    This binding for `depth' shadows the existing binding
      defined at dist/build/tmp-5551/System/FilePath/Find.hs:188:1

dist/build/tmp-5551/System/FilePath/Find.hs:224:22: Warning:
    This binding for `depth' shadows the existing binding
      defined at dist/build/tmp-5551/System/FilePath/Find.hs:188:1

dist/build/tmp-5551/System/FilePath/Find.hs:231:25: Warning:
    This binding for `depth' shadows the existing binding
      defined at dist/build/tmp-5551/System/FilePath/Find.hs:188:1

dist/build/tmp-5551/System/FilePath/Find.hs:267:15: Warning:
    This binding for `state' shadows the existing binding
      bound at dist/build/tmp-5551/System/FilePath/Find.hs:264:38

dist/build/tmp-5551/System/FilePath/Find.hs:267:21: Warning:
    This binding for `path' shadows the existing binding
      bound at dist/build/tmp-5551/System/FilePath/Find.hs:264:44

dist/build/tmp-5551/System/FilePath/Find.hs:267:26: Warning:
    This binding for `depth' shadows the existing binding
      defined at dist/build/tmp-5551/System/FilePath/Find.hs:188:1

dist/build/tmp-5551/System/FilePath/Find.hs:272:18: Warning:
    This binding for `state' shadows the existing binding
      bound at dist/build/tmp-5551/System/FilePath/Find.hs:264:38

dist/build/tmp-5551/System/FilePath/Find.hs:272:28: Warning:
    This binding for `depth' shadows the existing binding
      defined at dist/build/tmp-5551/System/FilePath/Find.hs:188:1

dist/build/tmp-5551/System/FilePath/Find.hs:275:53: Warning:
    This binding for `state' shadows the existing binding
      bound at dist/build/tmp-5551/System/FilePath/Find.hs:272:18

dist/build/tmp-5551/System/FilePath/Find.hs:277:25: Warning:
    This binding for `path' shadows the existing binding
      bound at dist/build/tmp-5551/System/FilePath/Find.hs:264:44
Haddock coverage:
 100% (  6 /  6) in 'System.FilePath.Manip'
 100% (  7 /  7) in 'System.FilePath.GlobPattern'
 100% (  2 /  2) in 'System.FilePath.Glob'
  63% ( 38 / 60) in 'System.FilePath.Find'
Warning: System.FilePath.Find: could not find link destinations for:
    Control.Monad.Trans.State.Lazy.State Control.Monad.State.Class.get
Documentation created: dist/doc/html/filemanip/index.html
Installing library in
/srv/hackage/var/build/tmp-install/lib/filemanip-0.3.6.2/ghc-7.6.3
Registering filemanip-0.3.6.2...
Installed filemanip-0.3.6.2
Downloading vector-read-instances-0.0.2.0...
Configuring vector-read-instances-0.0.2.0...
Building vector-read-instances-0.0.2.0...
Preprocessing library vector-read-instances-0.0.2.0...
[1 of 1] Compiling Data.Vector.Unboxed.Read ( Data/Vector/Unboxed/Read.hs, dist/build/Data/Vector/Unboxed/Read.o )
In-place registering vector-read-instances-0.0.2.0...
Running Haddock for vector-read-instances-0.0.2.0...
Running hscolour for vector-read-instances-0.0.2.0...
Preprocessing library vector-read-instances-0.0.2.0...
Preprocessing library vector-read-instances-0.0.2.0...
Warning: The documentation for the following packages are not installed. No
links will be generated to these packages: rts-1.0
Haddock coverage:
 100% (  1 /  1) in 'Data.Vector.Unboxed.Read'
Documentation created: dist/doc/html/vector-read-instances/index.html
Installing library in
/srv/hackage/var/build/tmp-install/lib/vector-read-instances-0.0.2.0/ghc-7.6.3
Registering vector-read-instances-0.0.2.0...
Installed vector-read-instances-0.0.2.0
Downloading Biobase-0.3.1.1...
Configuring Biobase-0.3.1.1...
Building Biobase-0.3.1.1...
Preprocessing library Biobase-0.3.1.1...
[ 1 of 42] Compiling Biobase.Types.Ring ( Biobase/Types/Ring.hs, dist/build/Biobase/Types/Ring.o )

<no location info>:
    Warning: Couldn't figure out LLVM version!
             Make sure you have installed LLVM
ghc: could not execute: opt
Failed to install Biobase-0.3.1.1
cabal: Error: some packages failed to install:
Biobase-0.3.1.1 failed during the building phase. The exception was:
ExitFailure 1

Test log

No test log was submitted for this report.