Index
| acgt | Biobase.Primary |
| acgu | Biobase.Primary |
| antiCT | Biobase.Secondary |
| baseL | Biobase.Secondary |
| baseP | Biobase.Secondary |
| baseR | Biobase.Secondary |
| BaseSelect | Biobase.Secondary |
| baseT | Biobase.Secondary |
| bonusCC | Biobase.Secondary.Constraint |
| bonusTable | Biobase.Secondary.Constraint |
| Bounds | Biobase.Primary.Bounds |
| cgnsP | Biobase.Secondary.Vienna |
| cguaP | Biobase.Secondary.Vienna |
| charCTList | Biobase.Secondary |
| charEdgeList | Biobase.Secondary |
| charNucList | Biobase.Primary |
| cHH | Biobase.Secondary |
| cHS | Biobase.Secondary |
| cHW | Biobase.Secondary |
| cis | Biobase.Secondary |
| Constraint | |
| 1 (Type/Class) | Biobase.Secondary.Constraint |
| 2 (Data Constructor) | Biobase.Secondary.Constraint |
| cSH | Biobase.Secondary |
| cSS | Biobase.Secondary |
| cSW | Biobase.Secondary |
| CT | Biobase.Secondary |
| ctCharList | Biobase.Secondary |
| CTisomerism | Biobase.Secondary |
| cWH | Biobase.Secondary |
| cWS | Biobase.Secondary |
| cWW | Biobase.Secondary |
| D1S | Biobase.Secondary.Diagrams |
| D1Secondary | Biobase.Secondary.Diagrams |
| d1sTree | Biobase.Secondary.Diagrams |
| d2Compare | Biobase.Secondary.Diagrams |
| d2Grouping | Biobase.Secondary.Diagrams |
| D2S | Biobase.Secondary.Diagrams |
| D2Secondary | Biobase.Secondary.Diagrams |
| d2sTree | Biobase.Secondary.Diagrams |
| defaultIsostericityMap | Biobase.Secondary.Isostericity |
| detailedCSV | Biobase.Secondary.Isostericity |
| dotBracket | Biobase.Secondary.Diagrams |
| Edge | |
| 1 (Type/Class) | Biobase.Secondary |
| 2 (Data Constructor) | Biobase.Secondary |
| edgeCharList | Biobase.Secondary |
| ExtPair | Biobase.Secondary |
| ExtPairAnnotation | Biobase.Secondary |
| ExtPairIdx | Biobase.Secondary |
| fromD1S | Biobase.Secondary.Diagrams |
| fromD2S | Biobase.Secondary.Diagrams |
| fromNuc | Biobase.Primary |
| fromViennaPair | Biobase.Secondary.Vienna |
| getClasses | Biobase.Secondary.Isostericity |
| HashedPrimary | |
| 1 (Type/Class) | Biobase.Primary.Hashed |
| 2 (Data Constructor) | Biobase.Primary.Hashed |
| hoogsteen | Biobase.Secondary |
| inClass | Biobase.Secondary.Isostericity |
| IsostericityLookup | Biobase.Secondary.Isostericity |
| maxExtended | Biobase.Primary.Bounds |
| maxNormal | Biobase.Primary.Bounds |
| minExtended | Biobase.Primary.Bounds |
| minNormal | Biobase.Primary.Bounds |
| MkConstraint | Biobase.Secondary.Constraint |
| mkConstraint | Biobase.Secondary.Constraint |
| mkD1S | Biobase.Secondary.Diagrams |
| MkD1Secondary | Biobase.Secondary.Diagrams |
| mkD2S | Biobase.Secondary.Diagrams |
| MkD2Secondary | Biobase.Secondary.Diagrams |
| mkHashedPrimary | Biobase.Primary.Hashed |
| mkIsostericityList | Biobase.Secondary.Isostericity |
| mkIsostericityMap | Biobase.Secondary.Isostericity |
| mkNuc | Biobase.Primary |
| MkPrimary | Biobase.Primary |
| mkPrimary | Biobase.Primary |
| MkViennaPair | Biobase.Secondary.Vienna |
| mkViennaPair | Biobase.Secondary.Vienna |
| nA | Biobase.Primary |
| nacgt | Biobase.Primary |
| nacgu | Biobase.Primary |
| nC | Biobase.Primary |
| nG | Biobase.Primary |
| nIMI | Biobase.Primary |
| nN | Biobase.Primary |
| nobonusCC | Biobase.Secondary.Constraint |
| nT | Biobase.Primary |
| nU | Biobase.Primary |
| Nuc | |
| 1 (Type/Class) | Biobase.Primary |
| 2 (Data Constructor) | Biobase.Primary |
| nucCharList | Biobase.Primary |
| Pair | Biobase.Secondary |
| PairIdx | Biobase.Secondary |
| pairToString | Biobase.Secondary.Vienna |
| paraCT | Biobase.Secondary |
| parsedCSV | Biobase.Secondary.Isostericity |
| Primary | Biobase.Primary |
| removeByCounting | Biobase.Secondary.PseudoKnots |
| RemovePseudoKnots | Biobase.Secondary.PseudoKnots |
| revPair | Biobase.Secondary.Vienna |
| SSExt | Biobase.Secondary.Diagrams |
| SSTree | |
| 1 (Type/Class) | Biobase.Secondary.Diagrams |
| 2 (Data Constructor) | Biobase.Secondary.Diagrams |
| sugar | Biobase.Secondary |
| test | Biobase.Secondary.Diagrams |
| test' | Biobase.Secondary.Diagrams |
| tHH | Biobase.Secondary |
| threeChar | Biobase.Secondary |
| tHS | Biobase.Secondary |
| tHW | Biobase.Secondary |
| trans | Biobase.Secondary |
| tSH | Biobase.Secondary |
| tSS | Biobase.Secondary |
| tSW | Biobase.Secondary |
| tWH | Biobase.Secondary |
| tWS | Biobase.Secondary |
| tWW | Biobase.Secondary |
| unConstraint | Biobase.Secondary.Constraint |
| unCT | Biobase.Secondary |
| unD1S | Biobase.Secondary.Diagrams |
| unD2S | Biobase.Secondary.Diagrams |
| unEdge | Biobase.Secondary |
| unknownCT | Biobase.Secondary |
| unknownEdge | Biobase.Secondary |
| unNuc | Biobase.Primary |
| updL | Biobase.Secondary |
| updP | Biobase.Secondary |
| updR | Biobase.Secondary |
| updT | Biobase.Secondary |
| ViennaPair | |
| 1 (Type/Class) | Biobase.Secondary.Vienna |
| 2 (Data Constructor) | Biobase.Secondary.Vienna |
| vpAU | Biobase.Secondary.Vienna |
| vpCG | Biobase.Secondary.Vienna |
| vpGC | Biobase.Secondary.Vienna |
| vpGU | Biobase.Secondary.Vienna |
| vpNP | Biobase.Secondary.Vienna |
| vpNS | Biobase.Secondary.Vienna |
| vpUA | Biobase.Secondary.Vienna |
| vpUG | Biobase.Secondary.Vienna |
| wc | Biobase.Secondary |