BiobaseXNA-0.9.3.1: Efficient RNA/DNA representations

Safe Haskell	None
Language	Haskell2010

Biobase.Primary.Nuc.XNA

Synopsis

Documentation

data XNA Source #

Combine both, RNA and DNA.

Instances

LetterChar XNA Source #
Methods letterChar :: Letter XNA -> Char Source # charLetter :: Char -> Letter XNA Source #
Bounded (Letter XNA) Source #
Methods minBound :: Letter XNA # maxBound :: Letter XNA #
Enum (Letter XNA) Source #
Methods succ :: Letter XNA -> Letter XNA # pred :: Letter XNA -> Letter XNA # toEnum :: Int -> Letter XNA # fromEnum :: Letter XNA -> Int # enumFrom :: Letter XNA -> [Letter XNA] # enumFromThen :: Letter XNA -> Letter XNA -> [Letter XNA] # enumFromTo :: Letter XNA -> Letter XNA -> [Letter XNA] # enumFromThenTo :: Letter XNA -> Letter XNA -> Letter XNA -> [Letter XNA] #
Read (Letter XNA) Source #
Methods readsPrec :: Int -> ReadS (Letter XNA) # readList :: ReadS [Letter XNA] # readPrec :: ReadPrec (Letter XNA) # readListPrec :: ReadPrec [Letter XNA] #
Show (Letter XNA) Source #
Methods showsPrec :: Int -> Letter XNA -> ShowS # show :: Letter XNA -> String # showList :: [Letter XNA] -> ShowS #
IsString [Letter XNA] Source #
Methods fromString :: String -> [Letter XNA] #
Degenerate (Letter XNA) Source #
Methods fromDegenerate :: Char -> [Letter XNA] Source # toDegenerate :: [Letter XNA] -> Maybe Char Source #
MkPrimary (Vector Char) XNA Source #
Methods primary :: Vector Char -> Primary XNA Source #

pattern A :: Letter XNA Source #

pattern C :: Letter XNA Source #

pattern G :: Letter XNA Source #

pattern T :: Letter XNA Source #

pattern U :: Letter XNA Source #

pattern N :: Letter XNA Source #

charXNA :: Char -> Letter XNA Source #

xnaChar :: Letter XNA -> Char Source #

xnaSeq :: MkPrimary n XNA => n -> Primary XNA Source #