--change-log--

1.3.0 Florian Eggenhofer 14. November 2019

• Fixed requested tick number for compilation with GHC 8.6.*
• Changed to Biobase style

1.2.3 Florian Eggenhofer 12. March 2018

• Fixed parsing of additional newline in Biopythons AlignIO output without conservation track

1.2.2 Florian Eggenhofer 07. March 2018

• Clustal parser can now parse alignments with missing consensus annotation

1.2.1 Florian Eggenhofer 06. February 2017

• Structural alignment parser now works with multiline consensus structures

1.2.0 Florian Eggenhofer 07. January 2017

• Changed datastructures for sequence identifers and sequences to Data.Text

1.1.4 Florian Eggenhofer 30. May 2016

• Fixed a bug in output of clustal alignments with sequence length of 60

1.1.3 Florian Eggenhofer 4. July 2015

• Nucleotide sequences are now parsed by a unified function in line with IUPAC nucleotide code

1.1.2 Florian Eggenhofer 3. July 2015

• Included parsing of optional field in mlocarna clustal output

1.1.1 Florian Eggenhofer 2. July 2015

• Added support for cmalign clustal output .

1.1.0 Florian Eggenhofer 1. July 2015

• Added Hspec test-suite for parsing functions
• Added Show instances for ClustalAlignment and StructuralClustalAlignment

1.0.3 Florian Eggenhofer 19. April 2015

• Added Y (pyrimidine) and R (purine) to sequence characters

1.0.2 [Florian Eggenhofer](mailto:florian.eggenhofer@univie.ac.at> 19. March 2015

* Linebreaks are now filtered from structural alignment sequence identifiers

1.0.1 [Florian Eggenhofer](mailto:florian.eggenhofer@univie.ac.at> 27. October 2014

* Fixed compiler warnings and updated documentation to mention structural clustal format
* Added -Wall and -O2 compiler options
* Added support for clustal alignments with secondary structure annotation