| annotateWithEnergy | BioInf.RNAEval |
| backtrack | BioInf.RNAFold, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| bulgeLIdx | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| bulgeLOpt | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| bulgeRIdx | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| bulgeROpt | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| calcLargeLoop | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| calcNinio | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| calcTermAU | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| explainTree | BioInf.RNAEval |
| externalAddLoopIdx | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| externalAddLoopOpt | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| externalLoopIdx | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| externalLoopOpt | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| Fold | BioInf.RNAFold, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| fold | BioInf.RNAFold, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| FoldFunctions | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| foldST | BioInf.RNAFold, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| hairpinIdx | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| hairpinOpt | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| interior1xnLIdx | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| interior1xnLOpt | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| interior1xnRIdx | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| interior1xnROpt | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| largeInteriorLoopIdx | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| largeInteriorLoopOpt | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| mkTable | BioInf.RNAFold |
| mkTableWith | BioInf.RNAFold |
| multibranchAddKJHelixIdx | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| multibranchAddKJHelixOpt | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| multibranchCloseIdx | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| multibranchCloseOpt | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| multibranchIJLoopIdx | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| multibranchIJLoopOpt | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| multibranchKJHelixIdx | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| multibranchKJHelixOpt | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| multibranchUnpairedJIdx | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| multibranchUnpairedJOpt | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| pair | BioInf.RNAFold.Functions |
| Pairlist | BioInf.RNAFold |
| ResultTables | BioInf.RNAFold |
| riap | BioInf.RNAFold.Functions |
| ringProductL | BioInf.RNAFold.Functions |
| ringSumL | BioInf.RNAFold.Functions |
| rnaEval | BioInf.RNAEval |
| stackIdx | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| stackOpt | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| tabbedInteriorLoopDistances | BioInf.RNAFold.Functions |
| tabbedInteriorLoopIdx | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| tabbedInteriorLoopOpt | BioInf.RNAFold.Functions, BioInf.RNAFold.Energy, BioInf.RNAFold.EnergyInt |
| Table | BioInf.RNAFold.Functions |
| treeIJ | BioInf.RNAEval |
| treeSum | BioInf.RNAEval |
| TurnerTables | BioInf.RNAFold.Functions |