Build #8 for RNAdesign-0.1.1.0
| Package | RNAdesign-0.1.1.0 |
|---|
| Install | DependencyFailed BiobaseXNA-0.8.3.0 |
|---|---|
| Docs | NotTried |
| Tests | NotTried |
| Time submitted | 2016-12-18 16:20:26.498743 UTC |
|---|---|
| Compiler | ghc-8.0.1.20161018 |
| OS | linux |
| Arch | x86_64 |
| Dependencies | BiobaseTurner-0.3.1.1, BiobaseVienna-0.3.0.0, BiobaseXNA-0.8.3.0, ParsecTools-0.0.2.0, PrimitiveArray-0.7.1.0, RNAFold-1.99.3.4, ViennaRNA-bindings-0.1.2.2, array-0.5.1.1, base-4.9.0.0, containers-0.5.7.1, fgl-5.5.3.0, fgl-extras-decompositions-0.1.1.0, lens-4.15.1, monad-primitive-0.1, mwc-random-monad-0.7.3.1, parallel-3.2.1.0, parsec-3.1.11, primitive-0.6.1.0, random-1.1, transformers-0.5.2.0, tuple-0.3.0.2, vector-0.11.0.0, bytestring-0.10.8.1, cmdargs-0.10.14, file-embed-0.0.10 |
| Flags | none |
Code Coverage
No Code Coverage was submitted for this report.
Build log
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Resolving dependencies...
Configuring OneTuple-0.2.1...
Configuring ViennaRNA-bindings-0.1.2.2...
Building OneTuple-0.2.1...
Building ViennaRNA-bindings-0.1.2.2...
Configuring base-compat-0.9.1...
Installed OneTuple-0.2.1
Building base-compat-0.9.1...
Configuring bytestring-lexing-0.5.0.2...
Installed base-compat-0.9.1
Building bytestring-lexing-0.5.0.2...
Configuring base-orphans-0.5.4...
Installed ViennaRNA-bindings-0.1.2.2
Building base-orphans-0.5.4...
Configuring cereal-0.5.4.0...
Installed base-orphans-0.5.4
Building cereal-0.5.4.0...
Configuring dlist-0.8.0.2...
Installed bytestring-lexing-0.5.0.2
Building dlist-0.8.0.2...
Configuring cmdargs-0.10.14...
Installed dlist-0.8.0.2
Building cmdargs-0.10.14...
Configuring fgl-5.5.3.0...
Installed cereal-0.5.4.0
Building fgl-5.5.3.0...
Configuring file-embed-0.0.10...
Installed fgl-5.5.3.0
Building file-embed-0.0.10...
Configuring mtl-2.2.1...
Installed file-embed-0.0.10
Building mtl-2.2.1...
Configuring parallel-3.2.1.0...
Installed mtl-2.2.1
Building parallel-3.2.1.0...
Configuring prelude-extras-0.4.0.3...
Installed cmdargs-0.10.14
Building prelude-extras-0.4.0.3...
Configuring primitive-0.6.1.0...
Installed parallel-3.2.1.0
Building primitive-0.6.1.0...
Configuring random-1.1...
Installed prelude-extras-0.4.0.3
Building random-1.1...
Configuring safe-0.3.10...
Installed primitive-0.6.1.0
Building safe-0.3.10...
Configuring semigroups-0.18.2...
Installed random-1.1
Building semigroups-0.18.2...
Configuring reflection-2.1.2...
Installed safe-0.3.10
Building reflection-2.1.2...
Configuring split-0.2.3.1...
Installed semigroups-0.18.2
Building split-0.2.3.1...
Configuring stm-2.4.4.1...
Installed split-0.2.3.1
Building stm-2.4.4.1...
Configuring strict-0.3.2...
Installed reflection-2.1.2
Configuring syb-0.6...
Installed stm-2.4.4.1
Building strict-0.3.2...
Building syb-0.6...
Configuring text-1.2.2.1...
Installed strict-0.3.2
Building text-1.2.2.1...
Configuring th-lift-0.7.6...
Installed syb-0.6
Building th-lift-0.7.6...
Configuring time-locale-compat-0.1.1.3...
Installed th-lift-0.7.6
Building time-locale-compat-0.1.1.3...
Configuring transformers-compat-0.5.1.4...
Installed time-locale-compat-0.1.1.3
Building transformers-compat-0.5.1.4...
Installed transformers-compat-0.5.1.4
Configuring tuple-0.3.0.2...
Building tuple-0.3.0.2...
Installed text-1.2.2.1
Configuring logict-0.6.0.2...
Building logict-0.6.0.2...
Configuring fgl-extras-decompositions-0.1.1.0...
Installed logict-0.6.0.2
Building fgl-extras-decompositions-0.1.1.0...
Configuring monad-primitive-0.1...
Installed fgl-extras-decompositions-0.1.1.0
Building monad-primitive-0.1...
Configuring tf-random-0.5...
Installed monad-primitive-0.1
Building tf-random-0.5...
Configuring vector-0.11.0.0...
Installed tuple-0.3.0.2
Configuring StateVar-1.1.0.4...
Installed tf-random-0.5
Building vector-0.11.0.0...
Building StateVar-1.1.0.4...
Configuring th-expand-syns-0.4.1.0...
Installed StateVar-1.1.0.4
Building th-expand-syns-0.4.1.0...
Configuring exceptions-0.8.3...
Installed th-expand-syns-0.4.1.0
Building exceptions-0.8.3...
Configuring mmorph-1.0.9...
Installed exceptions-0.8.3
Building mmorph-1.0.9...
Installed mmorph-1.0.9
Configuring tagged-0.8.5...
Building tagged-0.8.5...
Installed tagged-0.8.5
Configuring transformers-base-0.4.4...
Building transformers-base-0.4.4...
Installed transformers-base-0.4.4
Configuring hashable-1.2.4.0...
Building hashable-1.2.4.0...
Configuring parsec-3.1.11...
Installed hashable-1.2.4.0
Building parsec-3.1.11...
Configuring smallcheck-1.1.1...
Installed vector-0.11.0.0
Building smallcheck-1.1.1...
Configuring th-reify-many-0.1.6...
Installed parsec-3.1.11
Configuring pipes-4.2.0...
Installed smallcheck-1.1.1
Building th-reify-many-0.1.6...
Building pipes-4.2.0...
Configuring QuickCheck-2.8.2...
Installed th-reify-many-0.1.6
Building QuickCheck-2.8.2...
Configuring distributive-0.5.0.2...
Installed pipes-4.2.0
Building distributive-0.5.0.2...
Installed distributive-0.5.0.2
Configuring monad-control-1.0.1.0...
Building monad-control-1.0.1.0...
Installed monad-control-1.0.1.0
Configuring unordered-containers-0.2.7.1...
Building unordered-containers-0.2.7.1...
Configuring cereal-vector-0.2.0.1...
Installed QuickCheck-2.8.2
Building cereal-vector-0.2.0.1...
Configuring mwc-random-0.13.5.0...
Installed cereal-vector-0.2.0.1
Building mwc-random-0.13.5.0...
Configuring void-0.7.1...
Installed unordered-containers-0.2.7.1
Building void-0.7.1...
Configuring th-lift-instances-0.1.11...
Installed void-0.7.1
Building th-lift-instances-0.1.11...
Configuring vector-binary-instances-0.2.3.3...
Installed mwc-random-0.13.5.0
Building vector-binary-instances-0.2.3.3...
Configuring scientific-0.3.4.9...
Installed th-lift-instances-0.1.11
Building scientific-0.3.4.9...
Configuring vector-th-unbox-0.2.1.6...
Installed vector-binary-instances-0.2.3.3
Building vector-th-unbox-0.2.1.6...
Configuring vector-algorithms-0.7.0.1...
Installed vector-th-unbox-0.2.1.6
Configuring csv-0.1.2...
Installed scientific-0.3.4.9
Building vector-algorithms-0.7.0.1...
Building csv-0.1.2...
Configuring ParsecTools-0.0.2.0...
Installed csv-0.1.2
Building ParsecTools-0.0.2.0...
Installed ParsecTools-0.0.2.0
Configuring lifted-base-0.2.3.8...
Building lifted-base-0.2.3.8...
Installed lifted-base-0.2.3.8
Configuring contravariant-1.4...
Building contravariant-1.4...
Configuring repa-3.4.1.2...
Installed vector-algorithms-0.7.0.1
Building repa-3.4.1.2...
Configuring th-orphans-0.13.3...
Installed contravariant-1.4
Building th-orphans-0.13.3...
Configuring mwc-random-monad-0.7.3.1...
Installed th-orphans-0.13.3
Building mwc-random-monad-0.7.3.1...
Installed mwc-random-monad-0.7.3.1
Configuring attoparsec-0.13.1.0...
Building attoparsec-0.13.1.0...
Configuring bytes-0.15.2...
Installed attoparsec-0.13.1.0
Building bytes-0.15.2...
Configuring resourcet-1.1.8.1...
Installed repa-3.4.1.2
Building resourcet-1.1.8.1...
Installed resourcet-1.1.8.1
Configuring comonad-5...
Installed bytes-0.15.2
Configuring aeson-1.0.2.1...
Building aeson-1.0.2.1...
Building comonad-5...
Configuring conduit-1.2.8...
Installed comonad-5
Building conduit-1.2.8...
Installed conduit-1.2.8
Configuring bits-0.5...
Building bits-0.5...
Configuring bifunctors-5.4.1...
Installed bits-0.5
Building bifunctors-5.4.1...
Configuring OrderedBits-0.0.1.1...
Installed aeson-1.0.2.1
Building OrderedBits-0.0.1.1...
Installed OrderedBits-0.0.1.1
Installed bifunctors-5.4.1
Configuring profunctors-5.2...
Configuring semigroupoids-5.1...
Building profunctors-5.2...
Building semigroupoids-5.1...
Installed profunctors-5.2
Installed semigroupoids-5.1
Configuring free-4.12.4...
Building free-4.12.4...
Installed free-4.12.4
Configuring adjunctions-4.3...
Building adjunctions-4.3...
Installed adjunctions-4.3
Configuring kan-extensions-5.0.1...
Building kan-extensions-5.0.1...
Installed kan-extensions-5.0.1
Configuring DPutils-0.0.0.2...
Configuring lens-4.15.1...
Building DPutils-0.0.0.2...
Installed DPutils-0.0.0.2
Configuring PrimitiveArray-0.7.1.0...
Building lens-4.15.1...
Building PrimitiveArray-0.7.1.0...
Installed PrimitiveArray-0.7.1.0
Configuring ADPfusion-0.5.2.0...
Building ADPfusion-0.5.2.0...
Configuring BiobaseXNA-0.8.3.0...
Installed lens-4.15.1
Building BiobaseXNA-0.8.3.0...
Failed to install BiobaseXNA-0.8.3.0
Build log ( /home/builder/.cabal/logs/BiobaseXNA-0.8.3.0.log ):
cabal: Entering directory '/tmp/cabal-tmp-28514/BiobaseXNA-0.8.3.0'
Configuring BiobaseXNA-0.8.3.0...
Building BiobaseXNA-0.8.3.0...
Preprocessing library BiobaseXNA-0.8.3.0...
Biobase/Primary.hs:4:14: warning:
-XOverlappingInstances is deprecated: instead use per-instance pragmas OVERLAPPING/OVERLAPPABLE/OVERLAPS
Biobase/Secondary.hs:8:14: warning:
-XOverlappingInstances is deprecated: instead use per-instance pragmas OVERLAPPING/OVERLAPPABLE/OVERLAPS
[ 1 of 11] Compiling Biobase.Primary.IUPAC ( Biobase/Primary/IUPAC.hs, dist/build/Biobase/Primary/IUPAC.o )
[ 2 of 11] Compiling Biobase.Primary.Bounds ( Biobase/Primary/Bounds.hs, dist/build/Biobase/Primary/Bounds.o )
[ 3 of 11] Compiling Biobase.Primary ( Biobase/Primary.hs, dist/build/Biobase/Primary.o )
Biobase/Primary.hs:38:1: error:
Failed to load interface for ‘Data.Array.Repa.ExtShape’
Perhaps you meant
Data.Array.Repa.Shape (from repa-3.4.1.2)
Data.Array.Repa.Base
Data.Array.Repa.Eval (from repa-3.4.1.2)
Use -v to see a list of the files searched for.
cabal: Leaving directory '/tmp/cabal-tmp-28514/BiobaseXNA-0.8.3.0'
Installed ADPfusion-0.5.2.0
cabal: Error: some packages failed to install:
BiobaseTurner-0.3.1.1 depends on BiobaseXNA-0.8.3.0 which failed to install.
BiobaseVienna-0.3.0.0 depends on BiobaseXNA-0.8.3.0 which failed to install.
BiobaseXNA-0.8.3.0 failed during the building phase. The exception was:
ExitFailure 1
RNAFold-1.99.3.4 depends on BiobaseXNA-0.8.3.0 which failed to install.
RNAdesign-0.1.1.0 depends on BiobaseXNA-0.8.3.0 which failed to install.
Test log
No test log was submitted for this report.