SelectSequencesFromMSA-1.0.5: Selects a representative subset of sequences from multiple sequence alignment.

Safe HaskellNone
LanguageHaskell98

Bio.SelectSequencesLibrary

Description

This module contains functions for SelectSequences

Synopsis

Documentation

preprocessClustalForRNAz :: String -> String -> String -> Int -> Double -> Double -> Bool -> String -> IO (Either String (String, String)) Source #

preprocessClustalForRNAzExternal :: String -> String -> String -> Int -> Int -> Int -> Bool -> IO (Either String (String, String)) Source #

Call for external preprocessClustalForRNAz

preprocessClustalForRNAcodeExternal :: String -> String -> String -> Int -> Int -> Int -> Bool -> IO (Either String (String, String)) Source #

Call for external preprocessClustalForRNAcode - RNAcode additionally to RNAz requirements does not accept pipe,underscore, doublepoint symbols