The ViennaRNA-bindings package

[Tags:library]

Bindings to the ViennaRNA package, version 2.x.y.

Only a partial set of bindings is provided. If you need additional functions, please open an issue on github.

The ViennaRNA package needs to be installed. In addition, you should create a shared object from libRNA.a:

mkdir tmp; ar -x usrlib/libRNA.a; rm svm.o; gcc -shared *.o -o libRNA.so

Then, copy the resulting .so file into your library path or set LD_LIBRARY_PATH appropriately. This is only necessary, if you want ghci support.

If you use this software, please cite: R. Lorenz, S.H. Bernhart, C. Hoener zu Siederdissen, H. Tafer, C. Flamm, P.F. Stadler and I.L. Hofacker (2011), ViennaRNA Package 2.0, Algorithms for Molecular Biology: 6:26

Properties

Versions 0.0.2.3, 0.0.3.0, 0.1.0.0, 0.1.1.0, 0.1.1.1, 0.1.2.0, 0.1.2.2
Dependencies array, base (==4.*) [details]
License OtherLicense
Copyright The ViennaRNA Team 1994-2013
Author Christian Hoener zu Siederdissen (bindings) 2013, The ViennaRNA Team (library) 1994-2013
Maintainer choener@tbi.univie.ac.at
Stability Unknown
Category Bioinformatics, FFI
Home page http://www.tbi.univie.ac.at/~choener/
Uploaded Fri Oct 25 18:51:50 UTC 2013 by ChristianHoener
Distributions NixOS:0.1.2.2
Downloads 1721 total (25 in the last 30 days)
Votes
0 []
Status Docs not available [build log]
All reported builds failed as of 2015-12-08 [all 8 reports]

Modules

  • BioInf
    • ViennaRNA
      • BioInf.ViennaRNA.Bindings
        • FFI
          • BioInf.ViennaRNA.Bindings.FFI.CoFold
          • BioInf.ViennaRNA.Bindings.FFI.Fold
          • BioInf.ViennaRNA.Bindings.FFI.PartFunc
          • BioInf.ViennaRNA.Bindings.FFI.Utils

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