seqloc-0.5.1.1: Handle sequence locations for bioinformatics

Index

acceptorBio.SeqLoc.Transcript
allPosBio.SeqLoc.Location
andSameSeqBio.SeqLoc.OnSeq
atPosBio.SeqLoc.Position
boundsBio.SeqLoc.Location
cdsBio.SeqLoc.Transcript
cdsLocationBio.SeqLoc.Transcript
clocIntoBio.SeqLoc.Location
clocOutofBio.SeqLoc.Location
complBio.SeqLoc.Strand
concatBio.SeqLoc.SeqLike
ContigLocBio.SeqLoc.Location
contigOverlapsBio.SeqLoc.Location
ContigSeqLocBio.SeqLoc.OnSeq
donorBio.SeqLoc.Transcript
endPosBio.SeqLoc.Location
extendBio.SeqLoc.Location
fromBoundsStrandBio.SeqLoc.Location
fromContigsBio.SeqLoc.SpliceLocation
fromDonorAcceptorBio.SeqLoc.Transcript
fromPosLenBio.SeqLoc.Location
fromStartEndBio.SeqLoc.Location
geneIdBio.SeqLoc.Transcript
intronBio.SeqLoc.Transcript
Junction 
1 (Type/Class)Bio.SeqLoc.Transcript
2 (Data Constructor)Bio.SeqLoc.Transcript
junctionsBio.SeqLoc.Transcript
length 
1 (Function)Bio.SeqLoc.SeqLike
2 (Function)Bio.SeqLoc.Location
LocationBio.SeqLoc.Location
locationBio.SeqLoc.Transcript
locIntoBio.SeqLoc.SpliceLocation
locOutofBio.SeqLoc.SpliceLocation
LocReprBio.SeqLoc.LocRepr
mergeAdjContigsBio.SeqLoc.SpliceLocation
mergeContigsBio.SeqLoc.SpliceLocation
MinusBio.SeqLoc.Strand
ntAtBio.SeqLoc.SeqLike
Offset 
1 (Data Constructor)Bio.SeqLoc.Position
2 (Type/Class)Bio.SeqLoc.Position
offsetBio.SeqLoc.Position
offset5Bio.SeqLoc.Location
offsetWithinBio.SeqLoc.Location
OnSeq 
1 (Type/Class)Bio.SeqLoc.OnSeq
2 (Data Constructor)Bio.SeqLoc.OnSeq
onSeqLabelBio.SeqLoc.OnSeq
overlapsBio.SeqLoc.Location
PlusBio.SeqLoc.Strand
Pos 
1 (Type/Class)Bio.SeqLoc.Position
2 (Data Constructor)Bio.SeqLoc.Position
posIntoBio.SeqLoc.Location
posOutofBio.SeqLoc.Location
posWithinBio.SeqLoc.Location
reprBio.SeqLoc.LocRepr
reprStrBio.SeqLoc.LocRepr
revComplBio.SeqLoc.Strand
seqDataBio.SeqLoc.Location
seqDataPadBio.SeqLoc.Location
SeqLabel 
1 (Data Constructor)Bio.SeqLoc.OnSeq
2 (Type/Class)Bio.SeqLoc.OnSeq
SeqLikeBio.SeqLoc.SeqLike
SeqOffsetBio.SeqLoc.OnSeq
SeqPosBio.SeqLoc.OnSeq
slide 
1 (Function)Bio.SeqLoc.Position
2 (Function)Bio.SeqLoc.Location
sortContigsBio.SeqLoc.Transcript
SpliceLocBio.SeqLoc.SpliceLocation
SpliceSeqLocBio.SeqLoc.OnSeq
startPosBio.SeqLoc.Location
StrandBio.SeqLoc.Strand
strand 
1 (Function)Bio.SeqLoc.Position
2 (Function)Bio.SeqLoc.Location
StrandedBio.SeqLoc.Strand
strandedBio.SeqLoc.Strand
subseqBio.SeqLoc.SeqLike
subseqPadBio.SeqLoc.SeqLike
toContigsBio.SeqLoc.Location
toSeqLabelBio.SeqLoc.OnSeq
Transcript 
1 (Type/Class)Bio.SeqLoc.Transcript
2 (Data Constructor)Bio.SeqLoc.Transcript
trxIdBio.SeqLoc.Transcript
unOffBio.SeqLoc.Position
unOnSeqBio.SeqLoc.OnSeq
unreprBio.SeqLoc.LocRepr
unreprEitherBio.SeqLoc.LocRepr
unreprErrBio.SeqLoc.LocRepr
unreprMaybeBio.SeqLoc.LocRepr
unSeqLabelBio.SeqLoc.OnSeq
unSLBio.SeqLoc.OnSeq
utr3Bio.SeqLoc.Transcript
utr5Bio.SeqLoc.Transcript