bio-0.3.5: A bioinformatics library Source code Contents Index

Bio.GFF3.SGD

Documentation

chromosomes :: FeatureHierSequences -> [Feature] Source

genes :: FeatureHierSequences -> [Feature] Source

rRNAs :: FeatureHierSequences -> [Feature] Source

sortExons :: (Error e, MonadError e m) => [Feature] -> m [Feature] Source

geneSequence :: (Error e, MonadError e m) => FeatureHierSequences -> Feature -> m Sequence Source

geneSeqLoc :: (Error e, MonadError e m) => FeatureHierSequences -> Feature -> m SeqLoc Source

geneCDSes :: FeatureHierSequences -> Feature -> [Feature] Source

noncodingSequence :: (Error e, MonadError e m) => FeatureHierSequences -> Feature -> m Sequence Source

noncodingSeqLoc :: (Error e, MonadError e m) => FeatureHierSequences -> Feature -> m SeqLoc Source

noncodingExons :: FeatureHierSequences -> Feature -> [Feature] Source

namedSLM :: FeatureHierSequences -> SeqLocMap Feature Source

geneCDS_SLM :: (Error e, MonadError e m) => FeatureHierSequences -> m (SeqLocMap Feature) Source

Produced by Haddock version 2.4.2