bio-0.3.5: A bioinformatics library Source code Contents Index

Bio.Location.Strand

Synopsis

data Strand = Fwd | RevCompl class Stranded s where revCompl :: s -> s stranded :: Stranded s => Strand -> s -> s

Documentation

data Strand Source

Sequence strand Constructors Fwd RevCompl Instances Bounded Strand Enum Strand Eq Strand Ord Strand Read Strand Show Strand Ix Strand Stranded Strand

class Stranded s where Source

Anything, such as a location or a sequence, which lies on a strand and can thus be reverse complemented. Methods revCompl :: s -> s Source Instances Stranded Char Stranded ByteString Stranded Strand Stranded Pos Stranded ContigLoc Stranded Loc

stranded :: Stranded s => Strand -> s -> s Source

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