bioinformatics-toolkit-0.9.3: A collection of bioinformatics tools

Safe Haskell	None
Language	Haskell2010

Bio.RealWorld.BioGRID

Synopsis

data TAB2 = TAB2 {
- _biogridId :: ByteString
- _entrezIdA :: ByteString
- _entrezIdB :: ByteString
- _biogridIdA :: ByteString
- _biogridIdB :: ByteString
- _systematicNameA :: Text
- _systematicNameB :: Text
- _symbolA :: Text
- _symbolB :: Text
- _synonymsA :: [Text]
- _synonymsB :: [Text]
- _experimentalSystemName :: Text
- _experimentalSystemType :: Text
- _firstAuthor :: Text
- _pubmedId :: ByteString
- _organismIdA :: ByteString
- _organismIdB :: ByteString
- _throughput :: Text
- _score :: Maybe Double
- _ptm :: Text
- _phenotypes :: [Text]
- _qualifications :: [Text]
- _tags :: [Text]
- _source :: Text
}
fetchByGeneNames :: [String] -> IO [TAB2]

Documentation

data TAB2 Source #

BioGRID tab2 format

Constructors

Fields

_biogridId :: ByteString
_entrezIdA :: ByteString
_entrezIdB :: ByteString
_biogridIdA :: ByteString
_biogridIdB :: ByteString
_systematicNameA :: Text
_systematicNameB :: Text
_symbolA :: Text
_symbolB :: Text
_synonymsA :: [Text]
_synonymsB :: [Text]
_experimentalSystemName :: Text
_experimentalSystemType :: Text
_firstAuthor :: Text
_pubmedId :: ByteString
_organismIdA :: ByteString
_organismIdB :: ByteString
_throughput :: Text
_score :: Maybe Double
_ptm :: Text
_phenotypes :: [Text]
_qualifications :: [Text]
_tags :: [Text]
_source :: Text

Instances

Show TAB2 Source #
Instance details Defined in Bio.RealWorld.BioGRID Methods showsPrec :: Int -> TAB2 -> ShowS # show :: TAB2 -> String # showList :: [TAB2] -> ShowS #

fetchByGeneNames :: [String] -> IO [TAB2] Source #

retreive first 10,000 records