Bio.CMCompareResult

Parse CMCompare output parsing is done with parsec For more information on CMCompare consult: http://www.tbi.univie.ac.at/software/cmcompare/

Documentation

data CmcompareResult

Datastructure for result strings of comparisons between covariance models by CMCompare

Constructors

CmcompareResult

Fields

• model1Name :: String
• model2Name :: String
• linkscore1 :: Double
• linkscore2 :: Double
• linksequence :: String
• model1structure :: String
• model2structure :: String
• model1matchednodes :: [Int]
• model2matchednodes :: [Int]

Instances

Show CmcompareResult

Methods

showsPrec :: Int -> CmcompareResult -> ShowS

show :: CmcompareResult -> String

showList :: [CmcompareResult] -> ShowS

getCmcompareResults :: FilePath -> IO [Either ParseError CmcompareResult]

Parser for CMCompare result strings

getModelsNames :: [CmcompareResult] -> [String]

getModelNames :: CmcompareResult -> [String]