Bio.Protein.Chain

Documentation

module Bio.Chain

newtype ProteinChain i a

Constructors

ProteinChain

Fields

• getChain :: Chain i a

Instances

Foldable (ProteinChain i)

Defined in Bio.Protein.Chain

Methods

fold :: Monoid m => ProteinChain i m -> m

foldMap :: Monoid m => (a -> m) -> ProteinChain i a -> m

foldMap' :: Monoid m => (a -> m) -> ProteinChain i a -> m

foldr :: (a -> b -> b) -> b -> ProteinChain i a -> b

foldr' :: (a -> b -> b) -> b -> ProteinChain i a -> b

foldl :: (b -> a -> b) -> b -> ProteinChain i a -> b

foldl' :: (b -> a -> b) -> b -> ProteinChain i a -> b

foldr1 :: (a -> a -> a) -> ProteinChain i a -> a

foldl1 :: (a -> a -> a) -> ProteinChain i a -> a

toList :: ProteinChain i a -> [a]

null :: ProteinChain i a -> Bool

length :: ProteinChain i a -> Int

elem :: Eq a => a -> ProteinChain i a -> Bool

maximum :: Ord a => ProteinChain i a -> a

minimum :: Ord a => ProteinChain i a -> a

sum :: Num a => ProteinChain i a -> a

product :: Num a => ProteinChain i a -> a

Ix i => Traversable (ProteinChain i)

Defined in Bio.Protein.Chain

Methods

traverse :: Applicative f => (a -> f b) -> ProteinChain i a -> f (ProteinChain i b)

sequenceA :: Applicative f => ProteinChain i (f a) -> f (ProteinChain i a)

mapM :: Monad m => (a -> m b) -> ProteinChain i a -> m (ProteinChain i b)

sequence :: Monad m => ProteinChain i (m a) -> m (ProteinChain i a)

Functor (ProteinChain i)

Defined in Bio.Protein.Chain

Methods

fmap :: (a -> b) -> ProteinChain i a -> ProteinChain i b

(<$) :: a -> ProteinChain i b -> ProteinChain i a

IsString (ProteinChain Int AA)

Defined in Bio.Protein.Chain

Methods

fromString :: String -> ProteinChain Int AA

(Ix i, Show i, Show a) => Show (ProteinChain i a)

Defined in Bio.Protein.Chain

Methods

showsPrec :: Int -> ProteinChain i a -> ShowS

show :: ProteinChain i a -> String

showList :: [ProteinChain i a] -> ShowS

(Ix i, Enum i) => ChainLike (ProteinChain i a)

Defined in Bio.Protein.Chain

Methods

bounds :: ProteinChain i a -> (Index (ProteinChain i a), Index (ProteinChain i a))

assocs :: ProteinChain i a -> [(Index (ProteinChain i a), IxValue (ProteinChain i a))]

modify :: Index (ProteinChain i a) -> (IxValue (ProteinChain i a) -> IxValue (ProteinChain i a)) -> ProteinChain i a -> ProteinChain i a

modifyBefore :: Index (ProteinChain i a) -> (IxValue (ProteinChain i a) -> IxValue (ProteinChain i a)) -> ProteinChain i a -> ProteinChain i a

modifyAfter :: Index (ProteinChain i a) -> (IxValue (ProteinChain i a) -> IxValue (ProteinChain i a)) -> ProteinChain i a -> ProteinChain i a

unsafeRead :: ProteinChain i a -> Index (ProteinChain i a) -> IxValue (ProteinChain i a)

(Ix i, Eq a) => Eq (ProteinChain i a)

Defined in Bio.Protein.Chain

Methods

(==) :: ProteinChain i a -> ProteinChain i a -> Bool

(/=) :: ProteinChain i a -> ProteinChain i a -> Bool

Ix i => Ixed (ProteinChain i a)

Defined in Bio.Protein.Chain

Methods

ix :: Index (ProteinChain i a) -> Traversal' (ProteinChain i a) (IxValue (ProteinChain i a))

type Index (ProteinChain i a)

Defined in Bio.Protein.Chain

type Index (ProteinChain i a) = i

type IxValue (ProteinChain i a)

Defined in Bio.Protein.Chain

type IxValue (ProteinChain i a) = a