Bio.PDB.Type

Documentation

data Header

Constructors

Header

Fields

• classification :: Text
• depDate :: Text
• idCode :: Text

data Obsoleted

Constructors

Obsoleted

Fields

• repDate :: Text
• idCode :: Text
• rIdCode :: Array Int Text

data Caveat

Constructors

Caveat

Fields

• idCode :: Text
• comment :: Text

data Compound

Constructors

Compound

Fields

• molId :: Text
• molecule :: Text
• chain :: Array Int Text
• fragment :: Text
• synonym :: Array Int Text
• enzymeCommission :: Array Int Int
• engineered :: Bool
• mutation :: Bool
• otherDetails :: Array Int Text

data Organism

Constructors

Organism

Fields

• scientific :: Text
• common :: Text
• taxId :: Text

data ExpressionSystem

Constructors

ExpressionSystem

Fields

• name :: Text
• common :: Text
• taxId :: Text
• strain :: Text
• variant :: Text
• cellLine :: Text
• atcc :: Text
• organ :: Text
• tissue :: Text
• cell :: Text
• organelle :: Text
• cellularLocation :: Text
• vectorType :: Text
• vector :: Text
• plasmid :: Text
• gene :: Text
• otherDetails :: Text

data Source

Constructors

Source

Fields

• molId :: Text
• synthetic :: Text
• fragment :: Text
• organism :: Organism
• strain :: Text
• variant :: Text
• cellLine :: Text
• atcc :: Text
• tissue :: Text
• cell :: Text
• organelle :: Text
• secretion :: Text
• cellularLocation :: Text
• plasmid :: Text
• gene :: Text
• expressionSystem :: ExpressionSystem
• otherDetails :: Text

data Title

Constructors

Title

Fields

• header :: Header
• obsoleted :: Obsoleted
• title :: Text
• split :: Array Int Text
• caveat :: Caveat
• compound :: Array Int Compound

data PrimaryStructure

Constructors

PrimaryStructure

data Heterogen

Constructors

Heterogen

data Helix

Constructors

Helix

data Sheet

Constructors

Sheet

data Secondary

Constructors

Secondary

Fields

• helixes :: Array Int Helix
• sheets :: Array Int Sheet

data ConnectivityAnnotation

Constructors

ConnectivityAnnotation

data Miscellaneous

Constructors

Miscellaneous

data Transformation

Constructors

Transformation

data Coordinate

Constructors

Coordinate

data Connectivity

Constructors

Connectivity

data Bookkeeping

Constructors

Bookkeeping

data PDB

Constructors

PDB

Fields

• title :: Title
• primaryStructure :: PrimaryStructure
• heterogen :: Heterogen
• secondary :: Secondary
• connectivityAnnotation :: ConnectivityAnnotation
• miscellaneous :: Miscellaneous
• transformation :: Transformation
• coordinate :: Coordinate
• connectivity :: Connectivity
• bookkeeping :: Bookkeeping