Safe Haskell	None
Language	Haskell2010

Types

Synopsis

Documentation

data NodeLabel Source #

Constructors

NodeLabel
Fields nodeID :: !Text nodeLabels :: !Labels

Instances

Eq NodeLabel Source #
Methods (==) :: NodeLabel -> NodeLabel -> Bool # (/=) :: NodeLabel -> NodeLabel -> Bool #
Ord NodeLabel Source #
Methods compare :: NodeLabel -> NodeLabel -> Ordering # (<) :: NodeLabel -> NodeLabel -> Bool # (<=) :: NodeLabel -> NodeLabel -> Bool # (>) :: NodeLabel -> NodeLabel -> Bool # (>=) :: NodeLabel -> NodeLabel -> Bool # max :: NodeLabel -> NodeLabel -> NodeLabel # min :: NodeLabel -> NodeLabel -> NodeLabel #
Read NodeLabel Source #
Methods readsPrec :: Int -> ReadS NodeLabel # readList :: ReadS [NodeLabel] # readPrec :: ReadPrec NodeLabel # readListPrec :: ReadPrec [NodeLabel] #
Show NodeLabel Source #
Methods showsPrec :: Int -> NodeLabel -> ShowS # show :: NodeLabel -> String # showList :: [NodeLabel] -> ShowS #
Generic NodeLabel Source #
Associated Types type Rep NodeLabel :: * -> * # Methods from :: NodeLabel -> Rep NodeLabel x # to :: Rep NodeLabel x -> NodeLabel #
FromJSON NodeLabel Source #
Methods parseJSON :: Value -> Parser NodeLabel # parseJSONList :: Value -> Parser [NodeLabel] #
WorkableTree (Tree NodeLabel) Source #
Methods makeWorkable :: Tree NodeLabel -> Tree NodeLabel Source #
type Rep NodeLabel Source #
type Rep NodeLabel = D1 (MetaData "NodeLabel" "Types" "find-clumpiness-0.2.3.1-66lejvPNUuhJCX9xzFpJyq" False) (C1 (MetaCons "NodeLabel" PrefixI True) ((:*:) (S1 (MetaSel (Just Symbol "nodeID") NoSourceUnpackedness SourceStrict DecidedStrict) (Rec0 Text)) (S1 (MetaSel (Just Symbol "nodeLabels") NoSourceUnpackedness SourceStrict DecidedStrict) (Rec0 Labels))))

data Format Source #

Constructors

JSON
RJSON
Haskell HaskellFormat
Newick
Lineage Text

Instances

Read Format Source #
Methods readsPrec :: Int -> ReadS Format # readList :: ReadS [Format] # readPrec :: ReadPrec Format # readListPrec :: ReadPrec [Format] #

data HaskellFormat Source #

Constructors

BaseFormat
TreeFormat
DendrogramFormat

Instances

Read HaskellFormat Source #
Methods readsPrec :: Int -> ReadS HaskellFormat # readList :: ReadS [HaskellFormat] # readPrec :: ReadPrec HaskellFormat # readListPrec :: ReadPrec [HaskellFormat] #

data Exclusivity Source #

Constructors

Exclusive
AllExclusive
Majority

Instances

Read Exclusivity Source #
Methods readsPrec :: Int -> ReadS Exclusivity # readList :: ReadS [Exclusivity] # readPrec :: ReadPrec Exclusivity # readListPrec :: ReadPrec [Exclusivity] #

newtype Separator Source #

Constructors

Separator Text

Instances

Show Separator Source #
Methods showsPrec :: Int -> Separator -> ShowS # show :: Separator -> String # showList :: [Separator] -> ShowS #

newtype Field Source #

Constructors

Field Int

Instances

Show Field Source #
Methods showsPrec :: Int -> Field -> ShowS # show :: Field -> String # showList :: [Field] -> ShowS #

type Label = Text Source #

type Labels = Seq Label Source #

class WorkableTree a where Source #

Class of trees that can be converted to workable trees.

Minimal complete definition

makeWorkable

Methods

makeWorkable :: a -> Tree NodeLabel Source #

Instances

WorkableTree (Tree (Seq Text)) Source #
Methods makeWorkable :: Tree (Seq Text) -> Tree NodeLabel Source #
WorkableTree (Tree NodeLabel) Source #
Methods makeWorkable :: Tree NodeLabel -> Tree NodeLabel Source #
WorkableTree (Dendrogram (Seq Text)) Source #
Methods makeWorkable :: Dendrogram (Seq Text) -> Tree NodeLabel Source #